HHsearch alignment for GI: 254780824 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.00 E-value=0.026 Score=34.67 Aligned_cols=32 Identities=34% Similarity=0.505 Sum_probs=27.2
Q ss_pred HHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 84589969999878786889999999976078
Q gi|254780824|r 28 SILRLGDCLTLSGDLGSGKSFLARSIIRFLMH 59 (162)
Q Consensus 28 ~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~ 59 (162)
T Consensus 20 ~~v~~Ge~~~iiGpSGsGKSTLlr~i~Gl~~p 51 (235)
T cd03299 20 LEVERGDYFVILGPTGSGKSVLLETIAGFIKP 51 (235)
T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 79889989999999963599999999749999