>cd04110 Rab35 Rab35 subfamily. Rab35 is one of several Rab proteins to be found to participate in the regulation of osteoclast cells in rats. In addition, Rab35 has been identified as a protein that interacts with nucleophosmin-anaplastic lymphoma kinase (NPM-ALK) in human cells. Overexpression of NPM-ALK is a key oncogenic event in some anaplastic large-cell lymphomas; since Rab35 interacts with N|PM-ALK, it may provide a target for cancer treatments. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GTPases contain a lipid modification site at the C-terminus, with sequence motifs CC, CXC, or CCX. Lipid binding is

Probab=93.07  E-value=0.3  Score=28.23  Aligned_cols=60  Identities=15%  Similarity=0.184  Sum_probs=33.9

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH---HHCCCCCCEEEEEEECCCCHHHHHCC
Q ss_conf             99987878688999999997607888530245202011---00378860899986517897775305
Q gi|254780824|r   36 LTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLV---QLYDASIPVAHFDFYRLSSHQEVVEL   99 (162)
Q Consensus        36 i~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~---~~Y~~~~~i~H~DlYRL~~~~E~~~l   99 (162)
T Consensus         9 IvlvGd~~VGKTSli~r~~~~~F~~~----~~~Tig~d~~~k~v~i~~~~v~l~iwDtaGqe~~~~l   71 (199)
T cd04110           9 LLIIGDSGVGKSSLLLRFADNTFSGS----YITTIGVDFKIRTVEINGERVKLQIWDTAGQERFRTI   71 (199)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCCCC----CCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCC
T ss_conf             99999799888999999950999998----6897555878999999999999999989998123535