HHsearch alignment for GI: 254780824 and conserved domain: cd04135

>cd04135 Tc10 TC10 subfamily. TC10 is a Rho family protein that has been shown to induce microspike formation and neurite outgrowth in vitro. Its expression changes dramatically after peripheral nerve injury, suggesting an important role in promoting axonal outgrowth and regeneration. TC10 regulates translocation of insulin-stimulated GLUT4 in adipocytes and has also been shown to bind directly to Golgi COPI coat proteins. GTP-bound TC10 in vitro can bind numerous potential effectors. Depending on its subcellular localization and distinct functional domains, TC10 can differentially regulate two types of filamentous actin in adipocytes. TC10 mRNAs are highly expressed in three types of mouse muscle tissues: leg skeletal muscle, cardiac muscle, and uterus; they were also present in brain, with higher levels in adults than in newborns. TC10 has also been shown to play a role in regulating the expression of cystic fibrosis transmembrane conductance regulator (CFTR) through interacti
Probab=93.61  E-value=0.24  Score=28.84  Aligned_cols=83  Identities=18%  Similarity=0.201  Sum_probs=49.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC----CCCCEEEEEEECCCCHHHHHCCCHHHHCC-CCEE
Q ss_conf             999878786889999999976078885302452020110037----88608999865178977753058367508-9789
Q gi|254780824|r   36 LTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLYD----ASIPVAHFDFYRLSSHQEVVELGFDEILN-ERIC  110 (162)
Q Consensus        36 i~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y~----~~~~i~H~DlYRL~~~~E~~~lg~~e~~~-~~i~  110 (162)
T Consensus         3 iv~vGd~~VGKTsli~rf~~~~f~~~----y~pTi--~~~~~~~i~v~~~~~~l~i~DTaG~e~~~~~~~~~~~~a~~~i   76 (174)
T cd04135           3 CVVVGDGAVGKTCLLMSYANDAFPEE----YVPTV--FDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFL   76 (174)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCC----CCCEE--EEEEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHCCCCEEE
T ss_conf             99999899859999999962989988----68857--5202279999999999999979764031556599855787678


Q ss_pred             EE-------------E-CHHHHHCCCCC
Q ss_conf             99-------------9-85563204995
Q gi|254780824|r  111 II-------------E-WPEIGRSLLPK  124 (162)
Q Consensus       111 lI-------------E-Wpe~~~~~lp~  124 (162)
T Consensus        77 lvydi~~~~Sf~~~~~~w~~~~~~~~~~  104 (174)
T cd04135          77 ICFSVVNPASFQNVKEEWVPELKEYAPN  104 (174)
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9843797788999999999999986849