HHsearch alignment for GI: 254780824 and conserved domain: cd04138
>cd04138 H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily. H-Ras, N-Ras, and K-Ras4A/4B are the prototypical members of the Ras family. These isoforms generate distinct signal outputs despite interacting with a common set of activators and effectors, and are strongly associated with oncogenic progression in tumor initiation. Mutated versions of Ras that are insensitive to GAP stimulation (and are therefore constitutively active) are found in a significant fraction of human cancers. Many Ras guanine nucleotide exchange factors (GEFs) have been identified. They are sequestered in the cytosol until activation by growth factors triggers recruitment to the plasma membrane or Golgi, where the GEF colocalizes with Ras. Active (GTP-bound) Ras interacts with several effector proteins that stimulate a variety of diverse cytoplasmic signaling activities. Some are known to positively mediate the oncogenic properties of Ras, including Raf, phosphatidylinositol 3-kinase (PI3K), RalGEFs, and Tiam1.
Probab=94.13 E-value=0.16 Score=29.89 Aligned_cols=70 Identities=23% Similarity=0.336 Sum_probs=43.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC----CCCCEEEEEEECCCCHHHHHCCCHHHHCC--CCE
Q ss_conf 999878786889999999976078885302452020110037----88608999865178977753058367508--978
Q gi|254780824|r 36 LTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLYD----ASIPVAHFDFYRLSSHQEVVELGFDEILN--ERI 109 (162)
Q Consensus 36 i~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y~----~~~~i~H~DlYRL~~~~E~~~lg~~e~~~--~~i 109 (162)
T Consensus 4 vvlvGd~~VGKTsli~r~~~~~F~~~----y~~Ti~--~~~~k~~~i~~~~~~l~iwDtaG~e~~~~l-~~~~~~~a~~~ 76 (162)
T cd04138 4 LVVVGAGGVGKSALTIQLIQNHFVDE----YDPTIE--DSYRKQVVIDGETCLLDILDTAGQEEYSAM-RDQYMRTGEGF 76 (162)
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCC----CCCCCC--CEEEEEEEECCEEEEEEEEECCCCCCCCHH-HHHHHCCCCEE
T ss_conf 99989999889999999983928875----688555--279999999999999999979986011147-89871578779
Q ss_pred EEE
Q ss_conf 999
Q gi|254780824|r 110 CII 112 (162)
Q Consensus 110 ~lI 112 (162)
T Consensus 77 ilv 79 (162)
T cd04138 77 LCV 79 (162)
T ss_pred EEE
T ss_conf 999