HHsearch alignment for GI: 254780824 and conserved domain: cd04145
>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=92.95 E-value=0.27 Score=28.47 Aligned_cols=72 Identities=22% Similarity=0.305 Sum_probs=41.2
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC----CCCCEEEEEEECCCCHHHHHCCCHHHHCC--C
Q ss_conf 69999878786889999999976078885302452020110037----88608999865178977753058367508--9
Q gi|254780824|r 34 DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLYD----ASIPVAHFDFYRLSSHQEVVELGFDEILN--E 107 (162)
Q Consensus 34 ~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y~----~~~~i~H~DlYRL~~~~E~~~lg~~e~~~--~ 107 (162)
T Consensus 3 ~Kiv~lGd~~VGKTsli~r~~~~~f~~~----y~~Ti~--~~~~k~~~~~~~~~~l~iwDtaG~e~~~~~-~~~~~~~a~ 75 (164)
T cd04145 3 YKLVVVGGGGVGKSALTIQFIQSYFVTD----YDPTIE--DSYTKQCEIDGQWAILDILDTAGQEEFSAM-REQYMRTGE 75 (164)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCCCCC----CCCCEE--EEEEEEEEECCEEEEEEEEECCCCCCCCHH-HHHHHCCCC
T ss_conf 7999999999788999999980989875----678413--589999999999999999989886031256-798734678
Q ss_pred CEEEE
Q ss_conf 78999
Q gi|254780824|r 108 RICII 112 (162)
Q Consensus 108 ~i~lI 112 (162)
T Consensus 76 ~~ilv 80 (164)
T cd04145 76 GFLLV 80 (164)
T ss_pred CCEEE
T ss_conf 74689