HHsearch alignment for GI: 254780824 and conserved domain: pfam00308
>pfam00308 Bac_DnaA Bacterial dnaA protein.
Probab=93.20 E-value=0.29 Score=28.28 Aligned_cols=38 Identities=24% Similarity=0.340 Sum_probs=27.2
Q ss_pred HHHHHHHHHHCCCCC---EEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 999999998458996---9999878786889999999976078
Q gi|254780824|r 20 ICLGRHLASILRLGD---CLTLSGDLGSGKSFLARSIIRFLMH 59 (162)
Q Consensus 20 ~~la~~la~~l~~g~---ii~L~GdLGaGKTtfvr~i~~~lg~ 59 (162)
T Consensus 20 ~~~~~~i~~--~~~~~~npl~i~G~~G~GKTHLLqA~~~~~~~ 60 (219)
T pfam00308 20 HAAALAVAE--APGKAYNPLFIYGGVGLGKTHLLHAIGNYALR 60 (219)
T ss_pred HHHHHHHHH--CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999999996--75876782699889999888999999999998