HHsearch alignment for GI: 254780824 and conserved domain: pfam00308

>pfam00308 Bac_DnaA Bacterial dnaA protein.
Probab=93.20  E-value=0.29  Score=28.28  Aligned_cols=38  Identities=24%  Similarity=0.340  Sum_probs=27.2

Q ss_pred             HHHHHHHHHHCCCCC---EEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf             999999998458996---9999878786889999999976078
Q gi|254780824|r   20 ICLGRHLASILRLGD---CLTLSGDLGSGKSFLARSIIRFLMH   59 (162)
Q Consensus        20 ~~la~~la~~l~~g~---ii~L~GdLGaGKTtfvr~i~~~lg~   59 (162)
T Consensus        20 ~~~~~~i~~--~~~~~~npl~i~G~~G~GKTHLLqA~~~~~~~   60 (219)
T pfam00308        20 HAAALAVAE--APGKAYNPLFIYGGVGLGKTHLLHAIGNYALR   60 (219)
T ss_pred             HHHHHHHHH--CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             999999996--75876782699889999888999999999998