HHsearch alignment for GI: 254780824 and conserved domain: pfam07724

>pfam07724 AAA_2 AAA domain (Cdc48 subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.

Probab=92.97  E-value=0.16  Score=29.87  Aligned_cols=30  Identities=27%  Similarity=0.421  Sum_probs=26.1

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             996999987878688999999997607888
Q gi|254780824|r   32 LGDCLTLSGDLGSGKSFLARSIIRFLMHDD   61 (162)
Q Consensus        32 ~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~   61 (162)
T Consensus         2 p~~~~l~~GPsGvGKT~lAk~la~~l~~~~   31 (168)
T pfam07724         2 PIGSFLFLGPTGVGKTELAKALAELLFGDE   31 (168)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf             837999889899899999999999967985