HHsearch alignment for GI: 254780824 and conserved domain: smart00763
>smart00763 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=96.49 E-value=0.0073 Score=37.98 Aligned_cols=44 Identities=27% Similarity=0.215 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHHHCC----CCCEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 98999999999998458----996999987878688999999997607
Q gi|254780824|r 15 NEKNTICLGRHLASILR----LGDCLTLSGDLGSGKSFLARSIIRFLM 58 (162)
Q Consensus 15 ~~~~t~~la~~la~~l~----~g~ii~L~GdLGaGKTtfvr~i~~~lg 58 (162)
T Consensus 56 ~e~~i~~~V~~~k~AA~g~~~~k~IllL~GPvGsGKStl~~~Lk~~lE 103 (361)
T smart00763 56 MEEAIERFVNYFKSAAQGLEERKQILYLLGPVGGGKSSLVECLKRGLE 103 (361)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 489999999999999844671256999988998877999999999999