HHsearch alignment for GI: 254780826 and conserved domain: cd00484
>cd00484 PEPCK_ATP Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis. It catalyzes the reversible decarboxylation and phosphorylation of oxaloacetate to yield phosphoenolpyruvate and carbon dioxide, using a nucleotide molecule (ATP) for the phosphoryl transfer, and has a strict requirement for divalent metal ions for activity. PEPCK's separate into two phylogenetic groups based on their nucleotide substrate specificity, this model describes the ATP-dependent groups.
Probab=100.00 E-value=0 Score=1629.63 Aligned_cols=498 Identities=49% Similarity=0.871 Sum_probs=492.0
Q ss_pred CCEEECCCHHHHHHHHHHHCCCEECCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHH
Q ss_conf 2046279889999999972883882685489856876568713223616886544345767-875888999999999999
Q gi|254780826|r 10 SRVYRNLSTSRLYEESIRREKTILTCDGALRALTGQHTGRSAFDKFIVRDSHTENDVFWEN-NKYISPADFDTLKADMLD 88 (509)
Q Consensus 10 ~~v~~Nls~~eL~e~ai~~~eG~lt~~GAL~v~TG~~TGRSPkDKfIV~d~~t~d~I~Wg~-N~~i~~e~F~~L~~~v~~ 88 (509)
T Consensus 1 s~V~~NLs~~eL~E~Al~~~EG~ls~~GAL~v~TG~~TGRSPkDKfIV~d~~t~d~IwWG~vN~pis~e~F~~L~~kv~~ 80 (508)
T cd00484 1 THIHHNLSPAELYEEALKRGEGVLTSTGALAVDTGKKTGRSPKDKFIVDEPSSEDDIWWGKVNQPISEETFEILRERAVD 80 (508)
T ss_pred CCEECCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 94142799899999999719838936986898458977989887578589985455664898778899999999999999
Q ss_pred HHCCCCEEEEEEEEECCHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEE
Q ss_conf 86279469974255178323640287228710778999751254211134445661276458876374224566661699
Q gi|254780826|r 89 YIKDKDLFLQDLVACPHTKNAISVCVVTQYAWHSLFIRNLLKHKEDLGAVPNMMSLQVVVLPDFSADPNRHGCCSETIIA 168 (509)
Q Consensus 89 yl~~k~lyv~D~~~Gad~~~rl~vRvite~AwhaLF~~nmFirp~~~e~~~~~pd~tI~~aP~~~~~p~~~g~~Se~~i~ 168 (509)
T Consensus 81 yl~~k~lyV~D~~aGaD~~~rl~VRVite~AWhaLF~~NMFIrP~~~el~~f~pd~ti~~ap~f~~~~~~~g~~S~~~i~ 160 (508)
T cd00484 81 YLNTKKLFVFDGFAGADPEYRLKVRVITERAWHALFMRNMFIRPTEEELENFGPDFTIYNAPKFKANPETDGMNSETFVI 160 (508)
T ss_pred HHCCCCEEEEEEEEECCHHHEEEEEEEECCHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEE
T ss_conf 97179679995166069655045899973335999997512688857854779887999647874680105777773899
Q ss_pred EEHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCE
Q ss_conf 77221935664136788877899999986241078799312453477787027998335431112224788613303110
Q gi|254780826|r 169 VDLTAGLILIGGTSYAGEIKKSVFTYLNHIFPERGIMPMHCSINMDKEKEDVALFFGLSGTGKTTLSASVDRFLIGDDEH 248 (509)
Q Consensus 169 in~~~k~~lI~GT~YaGEiKKsiFtvmny~lp~~g~lpmHcsan~~~~~~d~alfFGLSGTGKTTLS~d~~r~LigDDeh 248 (509)
T Consensus 161 in~~~~~~lI~GT~YaGEiKKsiFsvmnylLP~~~vlpMHcSAnvg~~g-d~alFFGLSGTGKTTLSaDp~r~LIGDDEh 239 (508)
T cd00484 161 INFAEREMVIGGTEYAGEMKKGIFSVMNYLLPKKGVLSMHCSANVGKKG-DVALFFGLSGTGKTTLSADPNRKLIGDDEH 239 (508)
T ss_pred EEHHHCEEEEECCHHHHHHHHHHHHHHHHHCHHCCCEEEEEECCCCCCC-CEEEEEECCCCCCEECCCCCCCCCCCCCEE
T ss_conf 6324285899537157778899999998757010842246430348899-779997237787100114898740267424
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCEECC-CCCEECCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 21567412345553211013583335135887530110312400578-98111147886767058986000431000256
Q gi|254780826|r 249 GWSKEGVFNFEGGCYAKSINLSKETEPEIFSASCRFGTVLENVVVDE-CGIPNFKDSSVTENTRAAYPLNFIHNHAPQSI 327 (509)
Q Consensus 249 gW~d~gvfn~EgGcYaK~i~Ls~~~EP~I~~aa~~~~ailENV~~d~-~~~~df~d~s~TeNtR~~yp~~~i~n~~~~~~ 327 (509)
T Consensus 240 gW~d~GvfN~EgGCYAK~i~Ls~e~EP~I~~A-i~fgavlENVv~d~~~~~~df~d~s~TeNtR~~yP~~~i~n~~~~~~ 318 (508)
T cd00484 240 GWSDRGVFNIEGGCYAKCINLSEEKEPEIYNA-IKFGAVLENVVVDEETREVDYDDDSITENTRAAYPIEHIPNAVIPGV 318 (508)
T ss_pred EECCCCEECCCCCEEEEECCCCCCCCHHHHHH-HCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCC
T ss_conf 43588773255650432046884525579987-52261003325747888766445767764039848676417668566
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78872699960267788760444185889999974232456662000125653121001050015683153899999998
Q gi|254780826|r 328 GKHPKHVIMLAADAFGVLPPVAYLNPEKAVYYFLSGYTAKVAGTEKGVLKPEATFSACFGAPFMPRDPVQYGNILKDYIV 407 (509)
Q Consensus 328 ~~~p~~iifl~~d~~gvlPpvsklt~~qa~~~F~sGyT~k~agte~g~~ep~~tfs~cFg~PF~~~~p~~ya~ll~~~i~ 407 (509)
T Consensus 319 ~~~P~~iifLt~DafGVlPPvs~Lt~eQA~y~FlsGyTakvaGtE~Gv~ep~~tFS~Cfg~pFlp~~p~~Ya~lL~~~i~ 398 (508)
T cd00484 319 GGHPKNIIFLTADAFGVLPPVSKLTPEQAMYHFLSGYTAKVAGTERGITEPTATFSACFGAPFLPLHPTVYAEMLGEKIK 398 (508)
T ss_pred CCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 88987799994355678682110799999999871653245665357877775323665775567798999999999998
Q ss_pred HHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCHHHHCCCHHHH
Q ss_conf 81980999816746887688732078899999999984960246606678877425620798996564976625998999
Q gi|254780826|r 408 KYCVDCWLVNTGWTAGSYGEGYRMPLSVTRALLKAIFDNSIKSVPYRVDENFGFSVPLEVKGVDRKLLNPRDSWNDVEAY 487 (509)
Q Consensus 408 ~~~~~vyLvNTGw~Gg~~g~G~Ri~l~~Tr~ii~ai~~g~l~~~~~~~~~~f~l~iP~~~~gv~~~~l~P~~~w~d~~~Y 487 (509)
T Consensus 399 ~~~~~~~LvNTGw~GG~yg~G~R~~l~~Tr~~i~ai~~G~l~~~~~~~~~~f~~~iP~~~~gv~~~~l~Pr~~w~d~~~y 478 (508)
T cd00484 399 KHGAKVWLVNTGWTGGSYGVGKRIPLKYTRAIIDAILSGELNNAEYEKDPVFNLAIPTSIPGVPSEILNPRNTWADKEAY 478 (508)
T ss_pred HCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCHHHCCHHHHCCCHHHH
T ss_conf 74997899705666778888755255999999999865975577417778657105653899884656985635798999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999998751279
Q gi|254780826|r 488 DQKMRELLLMFENNAEKKQIKI 509 (509)
Q Consensus 488 ~~~a~~L~~~F~~Nf~~~~~~v 509 (509)
T Consensus 479 ~~~a~~La~~F~~Nf~k~~~~~ 500 (508)
T cd00484 479 DETAKKLAKLFIENFKKFADKV 500 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999999750248