HHsearch alignment for GI: 254780826 and conserved domain: cd00819
>cd00819 PEPCK_GTP Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis. It catalyzes the reversible decarboxylation and phosphorylation of oxaloacetate to yield phosphoenolpyruvate and carbon dioxide, using a nucleotide molecule (GTP) for the phosphoryl transfer, and has a strict requirement for divalent metal ions for activity. PEPCK's separate into two phylogenetic groups based on their nucleotide substrate specificity, this model describes the GTP-dependent group.
Probab=99.56 E-value=9.6e-11 Score=91.18 Aligned_cols=482 Identities=16% Similarity=0.146 Sum_probs=285.3
Q ss_pred CCCCCCCEEECCCH----HHHHHHHHHHCCCE-ECC-CCCEEEECC-CCCCCCCCCCEEECCCCCCCCCCCCC-CCCCCH
Q ss_conf 78682204627988----99999999728838-826-854898568-76568713223616886544345767-875888
Q gi|254780826|r 5 DLEGSSRVYRNLST----SRLYEESIRREKTI-LTC-DGALRALTG-QHTGRSAFDKFIVRDSHTENDVFWEN-NKYISP 76 (509)
Q Consensus 5 Gi~~~~~v~~Nls~----~eL~e~ai~~~eG~-lt~-~GAL~v~TG-~~TGRSPkDKfIV~d~~t~d~I~Wg~-N~~i~~ 76 (509)
T Consensus 10 ~L~~Pd~v~~cdGS~eE~~~l~~~~~~~g~~~~L~~~pn~~l~~sdp~DvARve~~TfI~t~~~----~dagp~nnw~~p 85 (579)
T cd00819 10 ELCQPDSVYICDGSEEEYDRLRDLMVEQGEEIRLNKYPNSYLARSDPSDVARVESRTFICSEDE----EDAGPTNNWMDP 85 (579)
T ss_pred HHCCCCEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEECCCCCCCEECCCEEEECCCC----CCCCCCCCCCCH
T ss_conf 8639987999489999999999999864874417899996787378010113115469945760----024874466798
Q ss_pred HHHHHHHHHH-HHHHCCCCEEEEEEEEEC-CHHHCCEEEEECCCCHHHHHHHHHCCCCCCCC--C--CCCCCCCEEEECC
Q ss_conf 9999999999-998627946997425517-83236402872287107789997512542111--3--4445661276458
Q gi|254780826|r 77 ADFDTLKADM-LDYIKDKDLFLQDLVACP-HTKNAISVCVVTQYAWHSLFIRNLLKHKEDLG--A--VPNMMSLQVVVLP 150 (509)
Q Consensus 77 e~F~~L~~~v-~~yl~~k~lyv~D~~~Ga-d~~~rl~vRvite~AwhaLF~~nmFirp~~~e--~--~~~~pd~tI~~aP 150 (509)
T Consensus 86 ~e~~~~l~~lf~G~M~GRTMYVipfsMGP~gSp~s~~gVqiTDS~YVv~sm~imtR~g~~vl~~l~~~~Fv~~vHSvG~p 165 (579)
T cd00819 86 EEMKAELKELFKGCMRGRTMYVIPFSMGPLGSPISKIGVELTDSPYVVHSMRIMTRMGKAVLDALGEGEFVPCLHSVGAP 165 (579)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 99999999763432369668996432078898523351262065776551899886009999861767705655215776
Q ss_pred CCCC-CCCCCCCCCCCEEEEEHHCCEEEEECCHHHHHH---HHHH-HHHHHHHCCCCCEEEEECCCCC--CCCCCEEEEE
Q ss_conf 8763-742245666616997722193566413678887---7899-9999862410787993124534--7778702799
Q gi|254780826|r 151 DFSA-DPNRHGCCSETIIAVDLTAGLILIGGTSYAGEI---KKSV-FTYLNHIFPERGIMPMHCSINM--DKEKEDVALF 223 (509)
Q Consensus 151 ~~~~-~p~~~g~~Se~~i~in~~~k~~lI~GT~YaGEi---KKsi-Ftvmny~lp~~g~lpmHcsan~--~~~~~d~alf 223 (509)
T Consensus 166 ~~~~~~~~~~~~~~~~~I~h~p~~~~I~S~gsgYGGNaLlgKKc~aLRiAs~~a~~eGWLAEHMlIlgi~~P~g-~~~yv 244 (579)
T cd00819 166 LSAGQKDVWPCNPEKKYIVHFPEEREIWSFGSGYGGNALLGKKCFALRIASVMARDEGWLAEHMLILGVTNPEG-EKKYF 244 (579)
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCC-CEEEE
T ss_conf 76777777899987269999667673999558868740332357888899887533252775423266427899-77999
Q ss_pred E--ECCCCCCCCCCCCC------CCEEEECCCEE--ECCCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCC
Q ss_conf 8--33543111222478------86133031102--156741---23455532110135833351358875301103124
Q gi|254780826|r 224 F--GLSGTGKTTLSASV------DRFLIGDDEHG--WSKEGV---FNFEGGCYAKSINLSKETEPEIFSASCRFGTVLEN 290 (509)
Q Consensus 224 F--GLSGTGKTTLS~d~------~r~LigDDehg--W~d~gv---fn~EgGcYaK~i~Ls~~~EP~I~~aa~~~~ailEN 290 (509)
T Consensus 245 aaAFPSaCGKTnlAMl~p~~pGwkv~~vGDDiawm~~~~dG~l~AiNPE~G~FGVapGt~~~tnP~am~~-l~~~~IFTN 323 (579)
T cd00819 245 AAAFPSACGKTNLAMLIPPLPGWKVETVGDDIAWMKFGEDGRLYAINPEAGFFGVAPGTNAKTNPNAMAT-LHKNTIFTN 323 (579)
T ss_pred EEECCCCCCCCCCEEECCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCCCHHHHHH-HHCCCEEEE
T ss_conf 8634644565421010478898545894174547788788967863664463123478887789899997-532744665
Q ss_pred CEECCCCCEECCC---------------------CCC----CCCEEEEEECCCCCCCCCC--CCCCCCCEEEEEECCCCC
Q ss_conf 0057898111147---------------------886----7670589860004310002--567887269996026778
Q gi|254780826|r 291 VVVDECGIPNFKD---------------------SSV----TENTRAAYPLNFIHNHAPQ--SIGKHPKHVIMLAADAFG 343 (509)
Q Consensus 291 V~~d~~~~~df~d---------------------~s~----TeNtR~~yp~~~i~n~~~~--~~~~~p~~iifl~~d~~g 343 (509)
T Consensus 324 Va~t~DG~vwWeG~~~~~p~~~~~~~~~g~~~~~~~~~paaHPNsRFt~p~~qcp~i~p~wedP~GVpIsaiiFGGRr~~ 403 (579)
T cd00819 324 VALTEDGDVWWEGLTEEPPEHLTDWQGLGKRWTPGDGEPAAHPNSRFTAPASQCPNIDPEWENPEGVPIDAIIFGGRRPD 403 (579)
T ss_pred EEECCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCC
T ss_conf 67768996310578889998623336789878899999677888755762666986684334888856889997674688
Q ss_pred CCCHHHHCCHHHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHH---HHHHHCCEEEEEE--
Q ss_conf 8760444185889999974232456-662000125653121001050015683153899999---9988198099981--
Q gi|254780826|r 344 VLPPVAYLNPEKAVYYFLSGYTAKV-AGTEKGVLKPEATFSACFGAPFMPRDPVQYGNILKD---YIVKYCVDCWLVN-- 417 (509)
Q Consensus 344 vlPpvsklt~~qa~~~F~sGyT~k~-agte~g~~ep~~tfs~cFg~PF~~~~p~~ya~ll~~---~i~~~~~~vyLvN-- 417 (509)
T Consensus 404 t~PlV~ea~dW~hGV~~GA~m~SE~TAAa~g~~g--~~r~dPmAmlPF~gyn~gdY~~HWL~~g~~~~~~~PkIF~VNwF 481 (579)
T cd00819 404 TVPLVYEAFNWNHGVFIGASMGSETTAAAEGKVG--VVRRDPFAMLPFCGYNMGDYFRHWLSFGRKLGAKLPKIFGVNWF 481 (579)
T ss_pred CCCCEEEECCCCCCEEEEEEECCHHHHHHHCCCC--CEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf 8871799415777579866650024466515665--27858211065567798999999999861166889978996114
Q ss_pred -CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCC----CCCCCCHHHCCHHHHCCCHHHHHHHHH
Q ss_conf -674688768873207889999999998496024660667887742562----079899656497662599899999999
Q gi|254780826|r 418 -TGWTAGSYGEGYRMPLSVTRALLKAIFDNSIKSVPYRVDENFGFSVPL----EVKGVDRKLLNPRDSWNDVEAYDQKMR 492 (509)
Q Consensus 418 -TGw~Gg~~g~G~Ri~l~~Tr~ii~ai~~g~l~~~~~~~~~~f~l~iP~----~~~gv~~~~l~P~~~w~d~~~Y~~~a~ 492 (509)
T Consensus 482 rkd~~G~flWPGfgdN~rvL~Wi~~R-~~G~~~---A~eTPi-G~-vP~~~~ldl~gL~~~~~~~-l~~vd~~~w~~E~~ 554 (579)
T cd00819 482 RKDEDGKFLWPGFGENSRVLKWIFRR-VEGKAN---AIETPI-GY-IPKYGDLDLKGLGKSKLDF-LFSVDEDYWLQELI 554 (579)
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHH-HCCCCC---CEECCC-CC-CCCCCCCCCCCCCCCCHHH-HCCCCHHHHHHHHH
T ss_conf 47799998178854112789999998-539656---030786-22-4586665764568845476-55869899999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780826|r 493 ELLLMFENN 501 (509)
Q Consensus 493 ~L~~~F~~N 501 (509)
T Consensus 555 ~~~~~f~~~ 563 (579)
T cd00819 555 EIEEYLEKI 563 (579)
T ss_pred HHHHHHHHH
T ss_conf 999999985