HHsearch results for GI: 254780826 and protein with PDBid: 1mx3_A
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepressor, transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=90.18 E-value=0.35 Score=26.39 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=62.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC-C-C--C
Q ss_conf 1568315389999999881980999816746887688732078899999999984960246606678877425-6-2--0
Q gi|254780826|r 391 MPRDPVQYGNILKDYIVKYCVDCWLVNTGWTAGSYGEGYRMPLSVTRALLKAIFDNSIKSVPYRVDENFGFSV-P-L--E 466 (509)
Q Consensus 391 ~~~~p~~ya~ll~~~i~~~~~~vyLvNTGw~Gg~~g~G~Ri~l~~Tr~ii~ai~~g~l~~~~~~~~~~f~l~i-P-~--~ 466 (509)
+|+.+..+.-+=++.++.-+-.++||||+ |=++=..-++++|.-+|.|..+ -.+.|--|= | . -
T Consensus 231 ~Plt~~T~~li~~~~l~~mk~gailIN~a----------RG~iVde~aL~~aL~~g~i~gA---aLDV~~~EP~~~~~~p 297 (347)
T 1mx3_A 231 CGLNEHNHHLINDFTVKQMRQGAFLVNTA----------RGGLVDEKALAQALKEGRIRGA---ALDVHESEPFSFSQGP 297 (347)
T ss_dssp CCCCTTCTTSBSHHHHTTSCTTEEEEECS----------CTTSBCHHHHHHHHHHTSEEEE---EESCCSSSSCCTTSST
T ss_pred CCCCCCCCCCCCHHHHHHCCCCCEEEEEC----------CCCEECHHHHHHHHHCCCCEEE---EEECCCCCCCCCCCHH
T ss_conf 55421224645799997378997899835----------7544758999999876983289---9966898899877506
Q ss_pred CCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 798996564976625998999999999999999999875
Q gi|254780826|r 467 VKGVDRKLLNPRDSWNDVEAYDQKMRELLLMFENNAEKK 505 (509)
Q Consensus 467 ~~gv~~~~l~P~~~w~d~~~Y~~~a~~L~~~F~~Nf~~~ 505 (509)
+-..|.-++.|...|...+++...+... .+|..+|
T Consensus 298 L~~~~nviiTPHia~~T~ea~~~~~~~~----~~nl~~~ 332 (347)
T 1mx3_A 298 LKDAPNLICTPHAAWYSEQASIEMREEA----AREIRRA 332 (347)
T ss_dssp TTTCSSEEECSSCTTCCHHHHHHHHHHH----HHHHHHH
T ss_pred HHCCCCEEECCCCCCCHHHHHHHHHHHH----HHHHHHH
T ss_conf 7649999998950108099999999999----9999999