HHsearch results for GI: 254780826 and protein with PDBid: 3jtm_A
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=94.12 E-value=0.066 Score=31.21 Aligned_cols=99 Identities=17% Similarity=0.161 Sum_probs=63.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCC-CCC--CC
Q ss_conf 156831538999999988198099981674688768873207889999999998496024660667887742-562--07
Q gi|254780826|r 391 MPRDPVQYGNILKDYIVKYCVDCWLVNTGWTAGSYGEGYRMPLSVTRALLKAIFDNSIKSVPYRVDENFGFS-VPL--EV 467 (509)
Q Consensus 391 ~~~~p~~ya~ll~~~i~~~~~~vyLvNTGw~Gg~~g~G~Ri~l~~Tr~ii~ai~~g~l~~~~~~~~~~f~l~-iP~--~~ 467 (509)
+|+.+.-+.-+=.+.++.-+-..|||||| |=++=...++++|.-+|.|..+ -.+.|--+ .|. .+
T Consensus 228 ~Plt~~T~~li~~~~~~~mk~~a~lIN~s----------RG~iVde~aL~~aL~~g~i~gA---~LDV~~~EP~~~~~pl 294 (351)
T 3jtm_A 228 MPLTEKTRGMFNKELIGKLKKGVLIVNNA----------RGAIMERQAVVDAVESGHIGGY---SGDVWDPQPAPKDHPW 294 (351)
T ss_dssp SCCCTTTTTCBSHHHHHHSCTTEEEEECS----------CGGGBCHHHHHHHHHHTSEEEE---EESCCSSSSCCTTCGG
T ss_pred CCCCCCCCCCCCHHHHHHCCCCCEEEECC----------CCCEECHHHHHHHHHHCCCEEE---EEECCCCCCCCCCCHH
T ss_conf 67874332563999997379997899858----------8753879999999972984299---9816999989998958
Q ss_pred CCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 989965649766259989999999999999999998751
Q gi|254780826|r 468 KGVDRKLLNPRDSWNDVEAYDQKMRELLLMFENNAEKKQ 506 (509)
Q Consensus 468 ~gv~~~~l~P~~~w~d~~~Y~~~a~~L~~~F~~Nf~~~~ 506 (509)
-..|.-++.|...|.-.+++.. ++.++.+|+++|-
T Consensus 295 ~~~~nvilTPHiag~T~e~~~~----~~~~~~eni~~~l 329 (351)
T 3jtm_A 295 RYMPNQAMTPHTSGTTIDAQLR----YAAGTKDMLERYF 329 (351)
T ss_dssp GTSTTBCCCCSCGGGSHHHHHH----HHHHHHHHHHHHH
T ss_pred HHCCCEEECCCCCCCCHHHHHH----HHHHHHHHHHHHH
T ss_conf 8499889988427284999999----9999999999998