HHSEARCH alignment of GI: 254780826 and SCOP domain: d1j3ba2

Alignment
>d1j3ba2 c.109.1.1 (A:2-211) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=586.32  Aligned_cols=203  Identities=35%  Similarity=0.618  Sum_probs=199.8

Q ss_pred             CCCCCCCCCCCEEECCCHHHHHHHHHHHCCCEECCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCC-CCCCCHHHH
Q ss_conf             9323786822046279889999999972883882685489856876568713223616886544345767-875888999
Q gi|254780826|r    1 MEKFDLEGSSRVYRNLSTSRLYEESIRREKTILTCDGALRALTGQHTGRSAFDKFIVRDSHTENDVFWEN-NKYISPADF   79 (509)
Q Consensus         1 L~~~Gi~~~~~v~~Nls~~eL~e~ai~~~eG~lt~~GAL~v~TG~~TGRSPkDKfIV~d~~t~d~I~Wg~-N~~i~~e~F   79 (509)
                      |+++||++.++|||||++++|+|+||+++||+++++|||+|.||+||||||||||||+|+.|+++||||+ |+||+++.|
T Consensus         3 L~~~Gi~~~~~v~~Nl~~~~L~e~ai~~~eG~l~~~GaL~v~TG~~TGRSPkDKfiV~d~~t~d~IwWg~vN~~is~e~F   82 (210)
T d1j3ba2           3 LEALGIHPKKRVFWNTVSPVLVEHTLLRGEGLLAHHGPLVVDTTPYTGRSPKDKFVVREPEVEGEIWWGEVNQPFAPEAF   82 (210)
T ss_dssp             CGGGTCCCSSCEEESCCHHHHHHHHHHTTSCEECTTSCEEECCTTCCSCCGGGEEEECCTTTTTTSCBTTTBEEECHHHH
T ss_pred             HHHCCCCCCCEEEECCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH
T ss_conf             57709999885783899899999999749818837987798458765769876189951221113012114612457899


Q ss_pred             HHHHHHHHHHHCCCCEEEEEEEEECCHHHCCEEEEECCCCHHHHHHHHHCCCCCC----CCCCCCCCCCEEEECCCCCCC
Q ss_conf             9999999998627946997425517832364028722871077899975125421----113444566127645887637
Q gi|254780826|r   80 DTLKADMLDYIKDKDLFLQDLVACPHTKNAISVCVVTQYAWHSLFIRNLLKHKED----LGAVPNMMSLQVVVLPDFSAD  155 (509)
Q Consensus        80 ~~L~~~v~~yl~~k~lyv~D~~~Gad~~~rl~vRvite~AwhaLF~~nmFirp~~----~e~~~~~pd~tI~~aP~~~~~  155 (509)
                      +.|+++|++||++|++||+|+||||||+||++||||||+||||||+|||||||+.    +|+..|.|||||+++|+|++|
T Consensus        83 ~~L~~~~~~yl~~k~lyv~D~~~Gad~~~r~~vRvite~AwhalF~~nMFirP~~~~~~~el~~f~Pd~tIi~ap~f~~~  162 (210)
T d1j3ba2          83 EALYQRVVQYLSERDLYVQDLYAGADRRYRLAVRVVTESPWHALFARNMFILPRRFGNDDEVEAFVPGFTVVHAPYFQAV  162 (210)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEEEECSSTTTCEEEEEEESCHHHHHHHHHHSBCGGGGC------CCCCSEEEEEETTCCCC
T ss_pred             HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHEECCCCCCCCHHHHHCCCCCCEEEECCCCCCC
T ss_conf             99999999998079727999897338533411688355552888864231155546765667324878579866766688


Q ss_pred             CCCCCCCCCCEEEEEHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             422456666169977221935664136788877899999986241078
Q gi|254780826|r  156 PNRHGCCSETIIAVDLTAGLILIGGTSYAGEIKKSVFTYLNHIFPERG  203 (509)
Q Consensus       156 p~~~g~~Se~~i~in~~~k~~lI~GT~YaGEiKKsiFtvmny~lp~~g  203 (509)
                      |+.||++|+++|++||++|++||+||+|||||||||||||||+||+||
T Consensus       163 p~~~g~~Se~~v~inf~~k~ilI~GT~YaGEiKKsiFsvmNylLP~~G  210 (210)
T d1j3ba2         163 PERDGTRSEVFVGISFQRRLVLIVGTKYAGEIKKSIFTVMNYLMPKRG  210 (210)
T ss_dssp             HHHHCCSSSCEEEEETTTTEEEEESCCCTHHHHHHHHHHHHHHGGGGT
T ss_pred             CCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             010588778789998335989997674030347889988885357798


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase N-terminal domain
superfamily: PEP carboxykinase N-terminal domain
family: PEP carboxykinase N-terminal domain
domain: Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase)
species: Thermus thermophilus [TaxId: 274]