HHSEARCH alignment of GI: 254780826 and SCOP domain: d1khba1

Alignment
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69  E-value=8.1e-06  Score=55.53  Aligned_cols=263  Identities=16%  Similarity=0.150  Sum_probs=156.5

Q ss_pred             CCCCCCCCCCC-CCC---C--EEEECCCEE--ECCCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCEEC
Q ss_conf             35431112224-788---6--133031102--156741---234555321101358333513588753011031240057
Q gi|254780826|r  226 LSGTGKTTLSA-SVD---R--FLIGDDEHG--WSKEGV---FNFEGGCYAKSINLSKETEPEIFSASCRFGTVLENVVVD  294 (509)
Q Consensus       226 LSGTGKTTLS~-d~~---r--~LigDDehg--W~d~gv---fn~EgGcYaK~i~Ls~~~EP~I~~aa~~~~ailENV~~d  294 (509)
                      .|+.|||+|+- .|.   -  ..||||-.=  +.++|.   .|-|-|.+-=.-+-+.+.-|.++++ ++.++|.-||.+.
T Consensus        26 PSaCGKTnlAMl~p~~pGwkv~~vGDDiawi~~~~dG~l~AiNPE~G~FGVapgt~~~tnp~am~~-l~~~~IFTNValt  104 (363)
T d1khba1          26 PSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKT-IQKNTIFTNVAET  104 (363)
T ss_dssp             CTTSCHHHHHTCCCCSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTCCTTTCHHHHHH-TTBSCEEESCEEE
T ss_pred             CCCCCCHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH-HCCCCEEEEEEEC
T ss_conf             744342108871889999677894174677778788967853665575344789898889999997-5368524435677


Q ss_pred             CCCCEECC---------------------CCCCC----CCEEEEEECCCCCCCCCC--CCCCCCCEEE-EEECCCCCCCC
Q ss_conf             89811114---------------------78867----670589860004310002--5678872699-96026778876
Q gi|254780826|r  295 ECGIPNFK---------------------DSSVT----ENTRAAYPLNFIHNHAPQ--SIGKHPKHVI-MLAADAFGVLP  346 (509)
Q Consensus       295 ~~~~~df~---------------------d~s~T----eNtR~~yp~~~i~n~~~~--~~~~~p~~ii-fl~~d~~gvlP  346 (509)
                      ++|.|-..                     ..|-+    -|.|-+.|....|+....  +-.+-|.+.| |=-+|+ ..+|
T Consensus       105 ~DG~vwWeG~~~~~~~~~~~~~w~g~~~~~~~~~paaHpNsRFt~p~~qcp~id~~wedP~GVpIsaiiFGGRr~-~t~P  183 (363)
T d1khba1         105 SDGGVYWEGIDEPLASGVTITSWKNKEWSSEDGEPCAHPNSRFCTPASQCPIIDAAWESPEGVPIEGIIFGGRRP-AGVP  183 (363)
T ss_dssp             TTSCEECTTCCCCCCTTCCEECTTSSEECTTSSSCSSCTTCEEEEEGGGCTTBCTTTTCTTCEEEEEEEEECCCS-SSCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCC-CCCC
T ss_conf             899746788988898775246788998888889977788752021376698668433598751477899756568-8887


Q ss_pred             HHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHH---HHCCEEEEEE---CCC
Q ss_conf             0444185889999974232456662000125653121001050015683153899999998---8198099981---674
Q gi|254780826|r  347 PVAYLNPEKAVYYFLSGYTAKVAGTEKGVLKPEATFSACFGAPFMPRDPVQYGNILKDYIV---KYCVDCWLVN---TGW  420 (509)
Q Consensus       347 pvsklt~~qa~~~F~sGyT~k~agte~g~~ep~~tfs~cFg~PF~~~~p~~ya~ll~~~i~---~~~~~vyLvN---TGw  420 (509)
                      +|..-..=+-.-|..+.-.|..+.+..|.. -+..+-+-=.-||+.++...|-+--.+--+   ..-.++|-||   .+=
T Consensus       184 lV~ea~~W~hGV~~GAtm~SE~TAAa~g~~-g~vrrdPmAMlpF~gyn~gdY~~hWL~~g~~~~~k~PkIF~VNWFrKd~  262 (363)
T d1khba1         184 LVYEALSWQHGVFVGAAMRSEATAAAEHKG-KIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFRKDK  262 (363)
T ss_dssp             SEEECSSHHHHHHHHHTCEEEC---------CCEEECGGGCTTTCSSCHHHHHHHHHHGGGSTTCBCCEEEEECSCCBCT
T ss_pred             CEEEECCCCCEEEEEEEECHHHHHHHHCCC-CCEECCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC
T ss_conf             248731466607873210104567764146-8643180665433288989999998765124656798479997653458


Q ss_pred             CCC----CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCC----CCCCCCHHHCCHHHHCCCHHHHHHHHH
Q ss_conf             688----768873207889999999998496024660667887742562----079899656497662599899999999
Q gi|254780826|r  421 TAG----SYGEGYRMPLSVTRALLKAIFDNSIKSVPYRVDENFGFSVPL----EVKGVDRKLLNPRDSWNDVEAYDQKMR  492 (509)
Q Consensus       421 ~Gg----~~g~G~Ri~l~~Tr~ii~ai~~g~l~~~~~~~~~~f~l~iP~----~~~gv~~~~l~P~~~w~d~~~Y~~~a~  492 (509)
                      .|.    .+|--.|+ |+.   |+ .-.+|+.+   -..-|+ |+ +|+    ...|++.+-+.. ..=-|+++|.+++.
T Consensus       263 ~GkFLWPGfGeN~RV-LkW---I~-~Rv~G~~~---A~eTPI-G~-vP~~~dLd~~GL~~~~~~e-l~~vd~~~w~~E~~  331 (363)
T d1khba1         263 EGKFLWPGFGENSRV-LEW---MF-NRIDGKAS---TKLTPI-GY-IPKEDALNLKGLGHINMME-LFSISKEFWDKEVE  331 (363)
T ss_dssp             TSCBSSCCGGGGHHH-HHH---HH-HHHTC--C---EEEETT-EE-EECTTCSCCTTCCCCCHHH-HTCCCHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHH-HHH---HH-HHHCCCCC---CCCCCC-EE-CCCCCCCCCCCCCHHHHHH-HHCCCHHHHHHHHH
T ss_conf             888657886315699-999---99-98649755---201676-31-2683446866788666999-83879999999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780826|r  493 ELLLMFENNA  502 (509)
Q Consensus       493 ~L~~~F~~Nf  502 (509)
                      .+-+-|.+.|
T Consensus       332 ~i~~~f~~~~  341 (363)
T d1khba1         332 DIEKYLVDQV  341 (363)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999999873


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: PEP carboxykinase C-terminal domain
domain: Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing)
species: Human (Homo sapiens) [TaxId: 9606]