HHsearch alignment for GI: 254780827 and conserved domain: COG0378

>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=97.91  E-value=0.00011  Score=51.66  Aligned_cols=136  Identities=21%  Similarity=0.297  Sum_probs=80.2

Q ss_pred             CCCCC-EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH-------CHHHCCCC--HHHHHHH
Q ss_conf             67876-79995278666733799999999973389868999508875882688760-------00201898--1331289
Q gi|254780827|r   79 ESKIP-FVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTAN-------NLMQRKGF--PESYDSN  148 (311)
Q Consensus        79 ~~k~P-fIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~-------~l~~rkGf--PeS~D~~  148 (311)
T Consensus         8 ~~~~~~~~i~v~Gp~GSGKTaLie~~~~~L~~--~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~   85 (202)
T COG0378           8 EKNRPMLRIGVGGPPGSGKTALIEKTLRALKD--EYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLE   85 (202)
T ss_pred             HHCCCEEEEEECCCCCCCHHHHHHHHHHHHHH--HCCEEEEECEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH
T ss_conf             72586489996179986789999999999975--2776899640400655999973779806874038765886788999


Q ss_pred             HHHHHHHHHH--------CCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCC----
Q ss_conf             9999999741--------2664058740443225658983699868965997061003576545757774010002----
Q gi|254780827|r  149 KLLTFLSDVK--------SGKKKVAVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDF----  216 (311)
Q Consensus       149 ~L~~~L~~lK--------~G~~~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~----  216 (311)
T Consensus        86 ai~~l~~~~~~~Dll~iEs~G-NL~~~-~sp~L~d~~--~v~Vid-----vteGe~~------P~K~gP~i~~aDllVIn  150 (202)
T COG0378          86 AIEELVLDFPDLDLLFIESVG-NLVCP-FSPDLGDHL--RVVVID-----VTEGEDI------PRKGGPGIFKADLLVIN  150 (202)
T ss_pred             HHHHHHHCCCCCCEEEEECCC-CEECC-CCCCHHHCE--EEEEEE-----CCCCCCC------CCCCCCCEEEEEEEEEE
T ss_conf             999986317767789992376-43244-680413046--999998-----7888887------65579964674189985


Q ss_pred             -CCEEEEEECCHHHHH
Q ss_conf             -311577308899988
Q gi|254780827|r  217 -LDFSIYIDADKRDIH  231 (311)
Q Consensus       217 -fD~sIyVDad~~~i~  231 (311)
T Consensus       151 K~DLa~~v~~dlevm~  166 (202)
T COG0378         151 KTDLAPYVGADLEVMA  166 (202)
T ss_pred             HHHHHHHHCCCHHHHH
T ss_conf             6773877286699999