HHsearch alignment for GI: 254780827 and conserved domain: COG1102

Probab=97.74  E-value=9e-05  Score=52.11  Aligned_cols=111  Identities=19%  Similarity=0.199  Sum_probs=65.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             99952786667337999999999733898689995088758826887600020189813312899999999741266405
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLLTFLSDVKSGKKKV  164 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~~~L~~lK~G~~~V  164 (311)
T Consensus         2 ~ItIsG~pGsG~TTva~~lAe~~g------l~~vsaG~iFR~~--A~e~gm-s------------l~ef~~-~-A-E---   54 (179)
T COG1102           2 VITISGLPGSGKTTVARELAEHLG------LKLVSAGTIFREM--ARERGM-S------------LEEFSR-Y-A-E---   54 (179)
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHC------CCEEECCHHHHHH--HHHCCC-C------------HHHHHH-H-H-H---
T ss_conf             799617999970279999999829------7156212799999--998399-9------------999999-8-7-5---


Q ss_pred             EEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf             87404432256589836998689659970610035765457577740100023115773088999887998878
Q gi|254780827|r  165 AVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRWYLNRF  238 (311)
Q Consensus       165 ~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~wyi~Rf  238 (311)
T Consensus        55 ~~p~iD~~iD~rq~-e--~a~-~~nvVlegrLA~-----------Wi-~k~~adlkI~L~Apl~vRa~Ria~RE  112 (179)
T COG1102          55 EDPEIDKEIDRRQK-E--LAK-EGNVVLEGRLAG-----------WI-VREYADLKIWLKAPLEVRAERIAKRE  112 (179)
T ss_pred             CCCHHHHHHHHHHH-H--HHH-CCCEEEHHHHHH-----------HH-HCCCCCEEEEEECCHHHHHHHHHHHC
T ss_conf             19216699889999-9--987-289587004578-----------87-33565468888575999999999860