HHsearch alignment for GI: 254780827 and conserved domain: COG1419
>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion].
Probab=97.62 E-value=0.00028 Score=48.81 Aligned_cols=77 Identities=25% Similarity=0.300 Sum_probs=51.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH-HCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCH--HHHHHHHHHHHHHHHHC
Q ss_conf 67999527866673379999999997-3389868999508875882688760002018981--33128999999997412
Q gi|254780827|r 83 PFVVGITGSVAVGKSTFARILCILLQ-QISNFKVSLITTDGFLFPNAVLTANNLMQRKGFP--ESYDSNKLLTFLSDVKS 159 (311)
Q Consensus 83 PfIIGIAG~~asGKST~Ar~L~~lL~-~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfP--eS~D~~~L~~~L~~lK~ 159 (311)
T Consensus 203 ~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtY-RIGA~EQLk~Ya~im~vp~~vv~~~~el~~ai~~l~~ 281 (407)
T COG1419 203 KRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTY-RIGAVEQLKTYADIMGVPLEVVYSPKELAEAIEALRD 281 (407)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC-HHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHC
T ss_conf 857999899887588799999999975325760689971441-1528999999999869955996399999999998531
Q ss_pred C
Q ss_conf 6
Q gi|254780827|r 160 G 160 (311)
Q Consensus 160 G 160 (311)
T Consensus 282 ~ 282 (407)
T COG1419 282 C 282 (407)
T ss_pred C
T ss_conf 8