HHsearch alignment for GI: 254780827 and conserved domain: COG3954

Probab=98.38  E-value=2.4e-06  Score=62.84  Aligned_cols=185  Identities=19%  Similarity=0.206  Sum_probs=110.1

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-HHHHH-----H--HCHHHCCCCHHHHHHHHHHH
Q ss_conf             8767999527866673379999999997338986899950887588-26887-----6--00020189813312899999
Q gi|254780827|r   81 KIPFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFP-NAVLT-----A--NNLMQRKGFPESYDSNKLLT  152 (311)
Q Consensus        81 k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~-n~~l~-----~--~~l~~rkGfPeS~D~~~L~~  152 (311)
T Consensus         4 KhP-iIavTGSSGAGTTTts~aFrKiF~~~-~I~aa~iEGDsFHR~tRpeMd~~Irkar~~GrhisyFgpeANdf~~LE~   81 (289)
T COG3954           4 KHP-VIAVTGSSGAGTTTTSLAFRKIFAQL-NIHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQ   81 (289)
T ss_pred             CCC-EEEEECCCCCCCCCHHHHHHHHHHHC-CCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHH
T ss_conf             786-68884478887544899999999851-7648660265312347266788999998728731002865330578999


Q ss_pred             HHHHH-HCCCCEEEEECCCCCC-----CCCCCCCEE----EECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEE
Q ss_conf             99974-1266405874044322-----565898369----9868965997061003576545757774010002311577
Q gi|254780827|r  153 FLSDV-KSGKKKVAVPRYSHSQ-----YDILEGEYD----TIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIY  222 (311)
Q Consensus       153 ~L~~l-K~G~~~V~~PvYsh~~-----~D~vp~~~~----vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIy  222 (311)
T Consensus        82 ~f~eYg~~G~G--r~R~YlHt~dEAvp~nq~PGTFTpW~~lpe~sDvLFYEGLHGgvVt~-------~~nvAqHvDlliG  152 (289)
T COG3954          82 TFIEYGQSGKG--RSRKYLHTYDEAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTP-------QHNVAQHVDLLVG  152 (289)
T ss_pred             HHHHHCCCCCC--CHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECC-------CCCHHHHHCEEEE
T ss_conf             99996424766--30112102222175578998777744079865536760454622258-------6247664053640


Q ss_pred             EECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             30889998879988788876652016777998860599899999999998863166899952013136649997
Q gi|254780827|r  223 IDADKRDIHRWYLNRFLKLRETAFLNPRSYFHHFTEISEEQSLKIAETAWNNINLPNLQHNILPTRKRADLILS  296 (311)
Q Consensus       223 VDad~~~i~~wyi~Rf~~lr~~a~~~~~s~~~~y~~l~~~ea~~~a~~iW~~in~pnl~e~I~PTr~rADlIi~  296 (311)
T Consensus       153 vVPivNLEWIQK~~RDt~~RG---------------hSrEAVmDsivRs-----MdDYinyItPQFSrThINFQ  206 (289)
T COG3954         153 VVPIVNLEWIQKLIRDTSERG---------------HSREAVMDSVVRS-----MDDYINYITPQFSRTHINFQ  206 (289)
T ss_pred             EEEEEEHHHHHHHHHCCCCCC---------------CCHHHHHHHHHHH-----HHHHHHHCCCCCCCCCCCEE
T ss_conf             356750999999973220147---------------5388889999871-----04467543752343335404