HHsearch alignment for GI: 254780827 and conserved domain: KOG2878
>KOG2878 consensus.
Probab=99.78 E-value=1.6e-17 Score=138.42 Aligned_cols=196 Identities=23% Similarity=0.349 Sum_probs=137.6
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHH-HHHHCC-CCCEEEEEECCCCCCHHH---HHH----HCHHHCCCCHHHHHH
Q ss_conf 76678767999527866673379999999-997338-986899950887588268---876----000201898133128
Q gi|254780827|r 77 KEESKIPFVVGITGSVAVGKSTFARILCI-LLQQIS-NFKVSLITTDGFLFPNAV---LTA----NNLMQRKGFPESYDS 147 (311)
Q Consensus 77 ~~~~k~PfIIGIAG~~asGKST~Ar~L~~-lL~~~~-~~~V~lis~DgF~~~n~~---l~~----~~l~~rkGfPeS~D~ 147 (311)
T Consensus 25 ~~G~~~Pl~igfSgPQGsGKstl~~ald~~lt~Ky~~E~s~~~~SvDDFYLThe~Q~eL~k~npnN~Llq~RGlaGtHD~ 104 (282)
T KOG2878 25 KDGDDVPLVIGFSGPQGSGKSTLVFALDYKLTKKYIQEYSSATISVDDFYLTHEGQAELRKKNPNNALLQYRGLAGTHDL 104 (282)
T ss_pred CCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEEECCEEEECHHHHHHHHHCCCCHHHCCCCCCCCCCH
T ss_conf 67886767999337888883043145678999985364414899721036602557888750999802114788885208
Q ss_pred HHHHHHHHHHHCCC---CEEEEECCCCCC----CCCCCC-CEEEECCCCEEEEECCHHCCCCCCCCCC-----C----C-
Q ss_conf 99999999741266---405874044322----565898-3699868965997061003576545757-----7----7-
Q gi|254780827|r 148 NKLLTFLSDVKSGK---KKVAVPRYSHSQ----YDILEG-EYDTIIQPDILLIEGINVLQQNSLSDNQ-----K----A- 209 (311)
Q Consensus 148 ~~L~~~L~~lK~G~---~~V~~PvYsh~~----~D~vp~-~~~vi~~pdIIIvEGi~vL~~~~l~~~~-----~----~- 209 (311)
T Consensus 105 kll~evLna~~k~~~d~~~v~vP~YdKS~f~G~GDR~d~sqw~k~~P~~~~ifEGWmlGF~Pl~-~~~v~a~d~l~Gdl~ 183 (282)
T KOG2878 105 KLLVEVLNALSKLTKDGLKVKVPRYDKSAFSGRGDRADSSQWPKVEPLSVIIFEGWMLGFKPLP-ADVVKAVDPLQGDLE 183 (282)
T ss_pred HHHHHHHHHHHCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC-HHHEECCCCCCCCHH
T ss_conf 9999999999717855656751544434316777778645675468616999820122665563-442333685555078
Q ss_pred CE-----EECCC----CCEEEEEECC-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 40-----10002----3115773088-99988799887888766520167779988605998999999999988631668
Q gi|254780827|r 210 TP-----MISDF----LDFSIYIDAD-KRDIHRWYLNRFLKLRETAFLNPRSYFHHFTEISEEQSLKIAETAWNNINLPN 279 (311)
Q Consensus 210 ~~-----~vsD~----fD~sIyVDad-~~~i~~wyi~Rf~~lr~~a~~~~~s~~~~y~~l~~~ea~~~a~~iW~~in~pn 279 (311)
T Consensus 184 ~VN~kL~~Y~d~~~k~Idslvv~~~q~inyVYrWRLQqEhal~~~----------~~kGMsDEeV~~FV~rY-----mP~ 248 (282)
T KOG2878 184 VVNKKLEAYYDAWDKYIDSLVVIKIQDINYVYRWRLQQEHALRQD----------GQKGMSDEEVNDFVSRY-----MPA 248 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHH----------HCCCCCHHHHHHHHHHH-----HHH
T ss_conf 776578887899998532179998527117665567778999986----------51688789999999851-----367
Q ss_pred HHHHHHHHHC
Q ss_conf 9995201313
Q gi|254780827|r 280 LQHNILPTRK 289 (311)
Q Consensus 280 l~e~I~PTr~ 289 (311)
T Consensus 249 Yk~Y-L~tl~ 257 (282)
T KOG2878 249 YKAY-LPTLY 257 (282)
T ss_pred HHHH-HHHHH
T ss_conf 7866-54554