HHsearch alignment for GI: 254780827 and conserved domain: PRK01184
>PRK01184 hypothetical protein; Provisional.
Probab=98.51 E-value=5.3e-07 Score=67.21 Aligned_cols=160 Identities=15% Similarity=0.194 Sum_probs=80.6
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHH-HHHHHHHHHHHHHCCCC
Q ss_conf 79995278666733799999999973389868999508875882688760002018981331-28999999997412664
Q gi|254780827|r 84 FVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESY-DSNKLLTFLSDVKSGKK 162 (311)
Q Consensus 84 fIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~-D~~~L~~~L~~lK~G~~ 162 (311)
T Consensus 2 ~iIGlTG~iGSGKstva~i~~e~-------G~~vi~~~Divr--~~v~~~------g~~~~~~~~~~~~~~lR~-~~G~~ 65 (183)
T PRK01184 2 MIIIVTGMPGSGKGEFSKIAREL-------GIPVVVMGDVIR--EEVKKR------GLPPTDENIGKVATDLRK-ELGMD 65 (183)
T ss_pred EEEEEECCCCCCHHHHHHHHHHC-------CCEEEECCHHHH--HHHHHC------CCCCCHHHHHHHHHHHHH-HHCCH
T ss_conf 39999689988789999999977-------993998607789--999983------899977899999999998-71955
Q ss_pred EEEEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCC-EEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 05874044322565898369986896599706100357654575777401000231-15773088999887998878887
Q gi|254780827|r 163 KVAVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLD-FSIYIDADKRDIHRWYLNRFLKL 241 (311)
Q Consensus 163 ~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD-~sIyVDad~~~i~~wyi~Rf~~l 241 (311)
T Consensus 66 -~----~a~~~~~~i~-----~~~~~~~vidgir~~~E~~--------~~~~~~~~~~li~V~A~~~~R~eRl~~R~r-- 125 (183)
T PRK01184 66 -A----VAIRTVPKIR-----ELGSELVVVDGVRGDAEVE--------YFRKEFEDFILVAIHAPPETRFERLKKRGR-- 125 (183)
T ss_pred -H----HHHHHHHHHH-----HCCCCEEEEECCCCHHHHH--------HHHHHCCCEEEEEEECCHHHHHHHHHHCCC--
T ss_conf -8----9999999997-----0379828981678789999--------999746984999998988899999984699--
Q ss_pred HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 66520167779988605998999999999988631668999520131366499975899
Q gi|254780827|r 242 RETAFLNPRSYFHHFTEISEEQSLKIAETAWNNINLPNLQHNILPTRKRADLILSKGED 300 (311)
Q Consensus 242 r~~a~~~~~s~~~~y~~l~~~ea~~~a~~iW~~in~pnl~e~I~PTr~rADlIi~k~~~ 300 (311)
T Consensus 126 ---~-~D~---------~s~e~f~~rd---~~E~~-----~~i~~~i~~AD~vI~N~gs 163 (183)
T PRK01184 126 ---S-DDP---------KTWEELRERD---ERELS-----WGIGEAIALADYMIVNDCT 163 (183)
T ss_pred ---C-CCC---------CCHHHHHHHH---HHHHC-----CCHHHHHHHCCEEEECCCC
T ss_conf ---8-896---------6799999999---98744-----6777899879999987998