HHsearch alignment for GI: 254780827 and conserved domain: PRK03839
>PRK03839 putative kinase; Provisional.
Probab=98.02 E-value=8e-05 Score=52.47 Aligned_cols=99 Identities=20% Similarity=0.282 Sum_probs=58.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99952786667337999999999733898689995088758826887600020189813312899999999741266405
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLLTFLSDVKSGKKKV 164 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~~~L~~lK~G~~~V 164 (311)
T Consensus 2 ~I~ITGTPGtGKTTva~~La~~lg------~~~i~v------~~la~~~~~~~~~d~~~~iD~d~l~~~~~~~~~~---- 65 (180)
T PRK03839 2 IIAITGTPGVGKTTISKLLAEKLG------YEYVNL------RDFALEKGIGEEKDDELEIDVDELAYFVEEEFKG---- 65 (180)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC------CEEEEH------HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC----
T ss_conf 899978999998999999999769------879879------9999983998676775046599999999987348----
Q ss_pred EEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 8740443225658983699868965997061003576545757774010002311577308899988799887
Q gi|254780827|r 165 AVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRWYLNR 237 (311)
Q Consensus 165 ~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~wyi~R 237 (311)
T Consensus 66 -----------------------~~~ivd~H~~h~~p---------------~D~VIVLR~~P~iL~~RL~~R 100 (180)
T PRK03839 66 -----------------------KNVVLDGHLSHLMP---------------ADLVIVLRAHPKLIAERLKER 100 (180)
T ss_pred -----------------------CCEEEEEECCCCCC---------------CCEEEEEECCHHHHHHHHHHC
T ss_conf -----------------------98899864314636---------------877999978869999999976