HHsearch alignment for GI: 254780827 and conserved domain: PRK04182
>PRK04182 cytidylate kinase; Provisional.
Probab=97.87 E-value=0.00023 Score=49.39 Aligned_cols=110 Identities=18% Similarity=0.314 Sum_probs=54.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99952786667337999999999733898689995088758826887600020189813312899999999741266405
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLLTFLSDVKSGKKKV 164 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~~~L~~lK~G~~~V 164 (311)
T Consensus 2 ~ItI~g~~GSGk~tIak~LA~~lg------~~~~d~g~i~r--------~~a~~~g~~~----~~~~~~~e---~----- 55 (178)
T PRK04182 2 RITISGPPGSGKTTVARLLAEKLG------LKLVSAGDIFR--------ELARERGMSL----EEFNKYAE---E----- 55 (178)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC------CEEECHHHHHH--------HHHHHCCCCH----HHHHHHHH---C-----
T ss_conf 899958998887999999999959------93872129999--------9999859999----99999985---1-----
Q ss_pred EEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 8740443225658983699868965997061003576545757774010002311577308899988799887
Q gi|254780827|r 165 AVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRWYLNR 237 (311)
Q Consensus 165 ~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~wyi~R 237 (311)
T Consensus 56 -~~~id~~~~~~~---~~~a~~~~~-Vi~GR~~~~------------il~~~~~l~ifl~A~~e~R~~Ri~~r 111 (178)
T PRK04182 56 -DPEIDKEIDRRQ---LELAKRGNV-VLEGRLAGW------------IVKNYADLKIYLKAPLEVRAKRIAER 111 (178)
T ss_pred -CHHHHHHHHHHH---HHHHHCCCE-EEECCCCCE------------EECCCCCEEEEEECCHHHHHHHHHHH
T ss_conf -926899999999---999853998-998388876------------97279877999989999999999973