HHsearch alignment for GI: 254780827 and conserved domain: PRK04182

>PRK04182 cytidylate kinase; Provisional.
Probab=97.87  E-value=0.00023  Score=49.39  Aligned_cols=110  Identities=18%  Similarity=0.314  Sum_probs=54.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             99952786667337999999999733898689995088758826887600020189813312899999999741266405
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLLTFLSDVKSGKKKV  164 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~~~L~~lK~G~~~V  164 (311)
T Consensus         2 ~ItI~g~~GSGk~tIak~LA~~lg------~~~~d~g~i~r--------~~a~~~g~~~----~~~~~~~e---~-----   55 (178)
T PRK04182          2 RITISGPPGSGKTTVARLLAEKLG------LKLVSAGDIFR--------ELARERGMSL----EEFNKYAE---E-----   55 (178)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHC------CEEECHHHHHH--------HHHHHCCCCH----HHHHHHHH---C-----
T ss_conf             899958998887999999999959------93872129999--------9999859999----99999985---1-----


Q ss_pred             EEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf             8740443225658983699868965997061003576545757774010002311577308899988799887
Q gi|254780827|r  165 AVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRWYLNR  237 (311)
Q Consensus       165 ~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~wyi~R  237 (311)
T Consensus        56 -~~~id~~~~~~~---~~~a~~~~~-Vi~GR~~~~------------il~~~~~l~ifl~A~~e~R~~Ri~~r  111 (178)
T PRK04182         56 -DPEIDKEIDRRQ---LELAKRGNV-VLEGRLAGW------------IVKNYADLKIYLKAPLEVRAKRIAER  111 (178)
T ss_pred             -CHHHHHHHHHHH---HHHHHCCCE-EEECCCCCE------------EECCCCCEEEEEECCHHHHHHHHHHH
T ss_conf             -926899999999---999853998-998388876------------97279877999989999999999973