HHsearch alignment for GI: 254780827 and conserved domain: PRK05703

Probab=97.90  E-value=6.5e-05  Score=53.08  Aligned_cols=86  Identities=27%  Similarity=0.300  Sum_probs=56.7

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCHHHHHHHCHHHCCCCH--HHHHHHHHHHHHHHHHCC
Q ss_conf             799952786667337999999999733-89868999508875882688760002018981--331289999999974126
Q gi|254780827|r   84 FVVGITGSVAVGKSTFARILCILLQQI-SNFKVSLITTDGFLFPNAVLTANNLMQRKGFP--ESYDSNKLLTFLSDVKSG  160 (311)
Q Consensus        84 fIIGIAG~~asGKST~Ar~L~~lL~~~-~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfP--eS~D~~~L~~~L~~lK~G  160 (311)
T Consensus       211 ~vvalVGPTGVGKTTTiAKLAA~~~l~~~~~kV~lIT~Dty-RigA~eQLk~Ya~ilgvp~~v~~~~~~l~~al~~~~~~  289 (412)
T PRK05703        211 GVVALVGPTGVGKTTTLAKLAARYALEEGKDKVALITLDTY-RIGAVEQLKTYAKIMGIPVKVAYDPKELAKALEQLANC  289 (412)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCC-CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC
T ss_conf             36999888887567699999999999729981799983767-77799999999997197379847999999999871589


Q ss_pred             CCEEEE--ECCCC
Q ss_conf             640587--40443
Q gi|254780827|r  161 KKKVAV--PRYSH  171 (311)
Q Consensus       161 ~~~V~~--PvYsh  171 (311)
T Consensus       290 -dlILIDTaG~s~  301 (412)
T PRK05703        290 -DLILIDTAGRSQ  301 (412)
T ss_pred             -CEEEEECCCCCC
T ss_conf             -979996898897