HHsearch alignment for GI: 254780827 and conserved domain: PRK06547

Probab=99.68  E-value=1.9e-15  Score=124.46  Aligned_cols=160  Identities=20%  Similarity=0.264  Sum_probs=114.0

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHH-HHHHHHHCCC
Q ss_conf             679995278666733799999999973389868999508875882688760002018981331289999-9999741266
Q gi|254780827|r   83 PFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLL-TFLSDVKSGK  161 (311)
Q Consensus        83 PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~-~~L~~lK~G~  161 (311)
T Consensus        15 ~~iVaIDG~sGaGKTTLA~~La~~---~~--~~~vvHmDD~Y-~GW----------~gl--~~~~~~l~~~VL~Pl~~G~   76 (184)
T PRK06547         15 MITVLIDGRSGSGKTTLAGELAAC---WE--GSQLVHLDDLY-PGW----------DGL--AAASEHVREALLDPRALGR   76 (184)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHH---CC--CCCEEEECCCC-CCC----------CCC--HHHHHHHHHHHHHHHCCCC
T ss_conf             699998689988889999999974---57--98289705777-776----------540--4689999999864641899


Q ss_pred             CEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf             40587404432256589836998689659970610035765457577740100023115773088999887998878887
Q gi|254780827|r  162 KKVAVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRWYLNRFLKL  241 (311)
Q Consensus       162 ~~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~wyi~Rf~~l  241 (311)
T Consensus        77 -~~~yr~~DW~~~~~--~~~~~v~~~~~lIvEGvga~~~~-----------~r~~~d~~IWve~~~~~r~~R~l~RDGe~  142 (184)
T PRK06547         77 -PGRWRRWDWANNCP--GGWVTVEPGRRLIIEGVGALTAA-----------NRALADLTVWLEGPEALRKQRALTRDPDY  142 (184)
T ss_pred             -CCEEECCCCCCCCC--CCCEECCCCCCEEEECCCCCCHH-----------HCCCCCEEEEEECCHHHHHHHHHHCCCCH
T ss_conf             -73660621578997--87567378881899662315631-----------31412377777489899999998609502


Q ss_pred             HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             66520167779988605998999999999988631668999520131366499975899
Q gi|254780827|r  242 RETAFLNPRSYFHHFTEISEEQSLKIAETAWNNINLPNLQHNILPTRKRADLILSKGED  300 (311)
Q Consensus       242 r~~a~~~~~s~~~~y~~l~~~ea~~~a~~iW~~in~pnl~e~I~PTr~rADlIi~k~~~  300 (311)
T Consensus       143 --------~~~w----------------~~W~~~E~~~fa--~~~~~~~AD~iv~~t~~  175 (184)
T PRK06547        143 --------APHW----------------DMWAAQEERHIA--RYDPRDVADLLGSDTAS  175 (184)
T ss_pred             --------HHHH----------------HHHHHHHHHHHH--CCCCHHHCEEEEECCCC
T ss_conf             --------6999----------------999999999985--59916608189837999