HHsearch alignment for GI: 254780827 and conserved domain: PRK10463
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional.
Probab=93.84 E-value=0.41 Score=27.36 Aligned_cols=141 Identities=15% Similarity=0.158 Sum_probs=66.4
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHH-HHCH-----HHCCCCHHHHHHHHHHHH
Q ss_conf 8767999527866673379999999997338-98689995088758826887-6000-----201898133128999999
Q gi|254780827|r 81 KIPFVVGITGSVAVGKSTFARILCILLQQIS-NFKVSLITTDGFLFPNAVLT-ANNL-----MQRKGFPESYDSNKLLTF 153 (311)
Q Consensus 81 k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~-~~~V~lis~DgF~~~n~~l~-~~~l-----~~rkGfPeS~D~~~L~~~ 153 (311)
T Consensus 102 ~gv~~lNl~sSPGSGKTtLL---e~ti~~L~~~~~~aVIeGD~~T~~DA~RI~~~Gv~avQInTG~~--CHLDA~MV~~a 176 (290)
T PRK10463 102 RKQLVLNLVSSPGSGKTTLL---TETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKG--CHLDAQMIADA 176 (290)
T ss_pred CCCEEEEECCCCCCCHHHHH---HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCC--CCCCHHHHHHH
T ss_conf 79189993069987889999---99999873367579996042356679999976995899547997--67599999999
Q ss_pred HHHHHCCCCEEEEECCCCCCCC-CCCCCEEEECCCCEEE---EECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHH
Q ss_conf 9974126640587404432256-5898369986896599---70610035765457577740100023115773088999
Q gi|254780827|r 154 LSDVKSGKKKVAVPRYSHSQYD-ILEGEYDTIIQPDILL---IEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRD 229 (311)
Q Consensus 154 L~~lK~G~~~V~~PvYsh~~~D-~vp~~~~vi~~pdIII---vEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~ 229 (311)
T Consensus 177 l~~l~l~~~dllf---IENVGNLVCPA~FDLGE~~kVvvlSVtEGeDKPlK-YP~mF~~ad~vlinKiDLlp~~dFD~~~ 252 (290)
T PRK10463 177 APRLPLDDNGILF---IENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLK-YPHMFAAASLMLLNKVDLLPYLNFDVEK 252 (290)
T ss_pred HHHCCCCCCCEEE---EECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC-CHHHHHHCCEEEEEHHHHHHHCCCCHHH
T ss_conf 9848987798999---81278843551203677617999970688886444-7667642578998656512202889999
Q ss_pred H
Q ss_conf 8
Q gi|254780827|r 230 I 230 (311)
Q Consensus 230 i 230 (311)
T Consensus 253 ~ 253 (290)
T PRK10463 253 C 253 (290)
T ss_pred H
T ss_conf 9