HHsearch alignment for GI: 254780827 and conserved domain: PRK11929

>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional.

Probab=97.52  E-value=0.0014  Score=44.01  Aligned_cols=99  Identities=21%  Similarity=0.247  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHH
Q ss_conf             98999998716776678767999527866673379999999997338986899950887588268876000201898133
Q gi|254780827|r   65 ITCHQYNKFLNLKEESKIPFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPES  144 (311)
Q Consensus        65 ~~~~~~~~fl~~~~~~k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS  144 (311)
T Consensus        95 al~~la~~fy~~ps--~~l~vigVTGT--NGKTTt~~~i~~il~~~-g~~~~~iGTlg~~~~~~~~~~~~----~TTP~~  165 (953)
T PRK11929         95 ALGELADEWYGKPS--QDLSVVAVTGT--NGKTSCAQWLAQMLTRL-GKPCGSIGTLGARLPDGQSLGGS----LTTPDV  165 (953)
T ss_pred             HHHHHHHHHHCCCC--CCCCEEEEECC--CCHHHHHHHHHHHHHHC-CCCEEEECCCCEECCCCCCCCCC----CCCCCH
T ss_conf             99999999864967--58878999799--97999999999999867-99889983245405876446789----999489


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf             128999999997412664058740443225
Q gi|254780827|r  145 YDSNKLLTFLSDVKSGKKKVAVPRYSHSQY  174 (311)
Q Consensus       145 ~D~~~L~~~L~~lK~G~~~V~~PvYsh~~~  174 (311)
T Consensus       166 ~~l~~~l~~~~~--~g~~~~vmEvSSHgL~  193 (953)
T PRK11929        166 ITLHRLLARMRA--AGADAVAMEASSHGLE  193 (953)
T ss_pred             HHHHHHHHHHHH--CCCCEEEEEECHHHHH
T ss_conf             999999999997--6997999983306776