HHsearch alignment for GI: 254780827 and conserved domain: PRK13851

>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=95.79  E-value=0.012  Score=37.62  Aligned_cols=45  Identities=20%  Similarity=0.362  Sum_probs=27.5

Q ss_pred             HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEEEE
Q ss_conf             998716776678767999527866673379999999997338-98689995
Q gi|254780827|r   70 YNKFLNLKEESKIPFVVGITGSVAVGKSTFARILCILLQQIS-NFKVSLIT  119 (311)
Q Consensus        70 ~~~fl~~~~~~k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~-~~~V~lis  119 (311)
T Consensus       151 ~~~fL~~aV~~r~--NIlIsGgTGSGKTTlln---ALl~~IP~~eRIvtIE  196 (343)
T PRK13851        151 LEAFLHACVVGRL--TMLLCGPTGSGKTTMSK---TLISAIPPQERLITIE  196 (343)
T ss_pred             HHHHHHHHHHCCC--CEEEECCCCCCHHHHHH---HHHHCCCCCCCEEEEC
T ss_conf             9999999997698--89998889861999999---9996289655279961