HHsearch alignment for GI: 254780827 and conserved domain: PRK13976

>PRK13976 thymidylate kinase; Provisional.
Probab=96.17  E-value=0.071  Score=32.51  Aligned_cols=129  Identities=23%  Similarity=0.291  Sum_probs=64.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCHHHHHHHCHHHCCCC-HHH-------HHHHHHHHH-H
Q ss_conf             99952786667337999999999733-8986899950887588268876000201898-133-------128999999-9
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQI-SNFKVSLITTDGFLFPNAVLTANNLMQRKGF-PES-------YDSNKLLTF-L  154 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~-~~~~V~lis~DgF~~~n~~l~~~~l~~rkGf-PeS-------~D~~~L~~~-L  154 (311)
T Consensus         2 fIvfEGiDGsGKsTq~~~L~~~L~~~~~~~~~~~trEPgg-t~~ge~IR~~ll~~~~~~~~te~lLf~A~R~eh~~~~I~   80 (202)
T PRK13976          2 FITFEGIDGSGKTTQSRLLAEYLSQIYGENNVVLTREPGG-TSFNESVRGLLLSTKNLDKLSELLLFIAMRREHFVKVIL   80 (202)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCC-CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8999899999899999999999986069986898379999-827899999971655799699999999999999999988


Q ss_pred             HHHHCCCCEEEEECCCCCCCCCCCCCEEEE-CCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHH
Q ss_conf             974126640587404432256589836998-6896599706100357654575777401000231157730889998879
Q gi|254780827|r  155 SDVKSGKKKVAVPRYSHSQYDILEGEYDTI-IQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRW  233 (311)
Q Consensus       155 ~~lK~G~~~V~~PvYsh~~~D~vp~~~~vi-~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~w  233 (311)
T Consensus        81 PaL~~g~-~VI~DRy~~St~A-----YQg~~~gl~~~~i~~l~~~~~~-~------------~PDlt~~Ldi~~e~al~R  141 (202)
T PRK13976         81 PALTQGK-IVICDRFIDSTIA-----YQGYGCGIDLKLIRDLNDLVVD-I------------YPDITFILDIDINQSLSR  141 (202)
T ss_pred             HHHHCCC-EEEECCCCCHHHH-----HHCCCCCCCHHHHHHHHHHHCC-C------------CCCEEEEEECCHHHHHHC
T ss_conf             8886699-8997485355788-----7322679899999999998407-8------------988799983788999752