HHsearch alignment for GI: 254780827 and conserved domain: PRK13976
>PRK13976 thymidylate kinase; Provisional.
Probab=96.17 E-value=0.071 Score=32.51 Aligned_cols=129 Identities=23% Similarity=0.291 Sum_probs=64.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCHHHHHHHCHHHCCCC-HHH-------HHHHHHHHH-H
Q ss_conf 99952786667337999999999733-8986899950887588268876000201898-133-------128999999-9
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQI-SNFKVSLITTDGFLFPNAVLTANNLMQRKGF-PES-------YDSNKLLTF-L 154 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~~-~~~~V~lis~DgF~~~n~~l~~~~l~~rkGf-PeS-------~D~~~L~~~-L 154 (311)
T Consensus 2 fIvfEGiDGsGKsTq~~~L~~~L~~~~~~~~~~~trEPgg-t~~ge~IR~~ll~~~~~~~~te~lLf~A~R~eh~~~~I~ 80 (202)
T PRK13976 2 FITFEGIDGSGKTTQSRLLAEYLSQIYGENNVVLTREPGG-TSFNESVRGLLLSTKNLDKLSELLLFIAMRREHFVKVIL 80 (202)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCC-CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999899999899999999999986069986898379999-827899999971655799699999999999999999988
Q ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCEEEE-CCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHH
Q ss_conf 974126640587404432256589836998-6896599706100357654575777401000231157730889998879
Q gi|254780827|r 155 SDVKSGKKKVAVPRYSHSQYDILEGEYDTI-IQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRW 233 (311)
Q Consensus 155 ~~lK~G~~~V~~PvYsh~~~D~vp~~~~vi-~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~w 233 (311)
T Consensus 81 PaL~~g~-~VI~DRy~~St~A-----YQg~~~gl~~~~i~~l~~~~~~-~------------~PDlt~~Ldi~~e~al~R 141 (202)
T PRK13976 81 PALTQGK-IVICDRFIDSTIA-----YQGYGCGIDLKLIRDLNDLVVD-I------------YPDITFILDIDINQSLSR 141 (202)
T ss_pred HHHHCCC-EEEECCCCCHHHH-----HHCCCCCCCHHHHHHHHHHHCC-C------------CCCEEEEEECCHHHHHHC
T ss_conf 8886699-8997485355788-----7322679899999999998407-8------------988799983788999752