HHsearch alignment for GI: 254780827 and conserved domain: TIGR00073
>TIGR00073 hypB hydrogenase accessory protein HypB; InterPro: IPR004392 The hydrogenase accessory protein HypB is a GTP hydrolase for assembly of nickel metallocentre of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel.; GO: 0016151 nickel ion binding, 0006461 protein complex assembly.
Probab=93.94 E-value=0.28 Score=28.42 Aligned_cols=55 Identities=18% Similarity=0.308 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEEEEECCCC
Q ss_conf 99998999998716776678767999527866673379999999997338-9868999508875
Q gi|254780827|r 62 SAKITCHQYNKFLNLKEESKIPFVVGITGSVAVGKSTFARILCILLQQIS-NFKVSLITTDGFL 124 (311)
Q Consensus 62 ~~~~~~~~~~~fl~~~~~~k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~-~~~V~lis~DgF~ 124 (311)
T Consensus 18 N~rlA~~Nr~~~~~-----~g~~~lNfmsspGSGKT~L---iEk~~~~~~~~~K~Avi~GD~~t 73 (225)
T TIGR00073 18 NDRLAEKNRERFDK-----EGLLVLNFMSSPGSGKTTL---IEKLIERLDDEVKIAVIEGDVQT 73 (225)
T ss_pred HHHHHHHHHHHHHH-----CCCEEEEECCCCCCCHHHH---HHHHHHHHCCCCCEEEEECCHHH
T ss_conf 88999999999986-----5978998025886115899---99999984578978999755322