HHsearch alignment for GI: 254780827 and conserved domain: TIGR00101
>TIGR00101 ureG urease accessory protein UreG; InterPro: IPR004400 This is a GTP hydrolase for assembly of the nickel metallocentre of urease. A similar protein, hypB, is an accessory protein for expression of hydrogenase, which also uses nickel. They play a central role in nitrogen metabolism.; GO: 0005524 ATP binding, 0016151 nickel ion binding.
Probab=95.90 E-value=0.013 Score=37.39 Aligned_cols=148 Identities=20% Similarity=0.331 Sum_probs=78.8
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH-HHCHH--------HCCCCHHHH---HHHHHH
Q ss_conf 799952786667337999999999733898689995088758826887-60002--------018981331---289999
Q gi|254780827|r 84 FVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLT-ANNLM--------QRKGFPESY---DSNKLL 151 (311)
Q Consensus 84 fIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~-~~~l~--------~rkGfPeS~---D~~~L~ 151 (311)
T Consensus 2 ~~iG~~GPvG~Gktal~e~l~~~~~~--~y~~av~tndiyt~eda~fl~~~~~l~~~ri~GvetGGCPhtairedas~nl 79 (199)
T TIGR00101 2 VKIGVAGPVGSGKTALIEALTRELAK--KYDLAVITNDIYTQEDAEFLVKNSVLPPERILGVETGGCPHTAIREDASLNL 79 (199)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf 36665047776468999999998874--0667787311001246888876412662226774158987300100021218
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCC-----CCEEEEEECC
Q ss_conf 99997412664058740443225658983699868965997061003576545757774010002-----3115773088
Q gi|254780827|r 152 TFLSDVKSGKKKVAVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDF-----LDFSIYIDAD 226 (311)
Q Consensus 152 ~~L~~lK~G~~~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~-----fD~sIyVDad 226 (311)
T Consensus 80 ~a~~~~~~rf~~~~~-~~~esGGdnl~atf-~P~l~d~t~~-vidva~G~kiPrkGGPGit~sdllvink~dlaP~vGad 156 (199)
T TIGR00101 80 EAVEELEARFPDLEL-VFIESGGDNLSATF-SPELADLTIF-VIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPFVGAD 156 (199)
T ss_pred HHHHHHHHCCCCEEE-EEEECCCCCCEEEC-CCCEEEEEEE-EEEECCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCC
T ss_conf 899988621564048-99832886200002-7640236788-99720587456778898530012243200125311230
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999887998878887
Q gi|254780827|r 227 KRDIHRWYLNRFLKL 241 (311)
Q Consensus 227 ~~~i~~wyi~Rf~~l 241 (311)
T Consensus 157 l~~-----m~rd~~~ 166 (199)
T TIGR00101 157 LKV-----MERDAKK 166 (199)
T ss_pred HHH-----HHHHHHH
T ss_conf 354-----4356786