HHsearch alignment for GI: 254780827 and conserved domain: TIGR00554

>TIGR00554 panK_bact pantothenate kinase; InterPro: IPR004566 Pantothenate kinase (2.7.1.33 from EC) catalyzes the rate-limiting step in the biosynthesis of coenzyme A, the conversion of pantothenate to D-4'-phosphopantothenate in the presence of ATP. It is very well conserved from Escherichia coli to Bacillus subtilis, but differs considerably from known eukaryotic forms, described in a separate family. It has been shown to be a homodimer in E. coli and is regulated by feedback inhibition by CoA and its thioesters.; GO: 0004594 pantothenate kinase activity, 0005524 ATP binding, 0015937 coenzyme A biosynthetic process, 0005737 cytoplasm.
Probab=100.00  E-value=0  Score=511.88  Aligned_cols=306  Identities=46%  Similarity=0.796  Sum_probs=298.4

Q ss_pred             CCCCCCCHHHHH-HHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             756001888997-3147999889899998744888468999999989999999999999999899999871677667876
Q gi|254780827|r    5 CFYHFFTSHEWA-VHSKFSSILSKKISNQLLSFDSPIDSTEIYKIYFPLSHLLLINVNSAKITCHQYNKFLNLKEESKIP   83 (311)
Q Consensus         5 ~~y~~~~r~~w~-~~~~~~~~l~~~~~~~l~~~~d~i~~~ev~~iy~pl~~ll~~~~~~~~~~~~~~~~fl~~~~~~k~P   83 (311)
T Consensus         1 ~p~l~~~~~~w~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~y~pl~~l~~~~~~~~~~~~~~~~~fl~~p~~~~~p   80 (309)
T TIGR00554         1 TPFLSFDREQWAELRDSVPLALSEEELKPLEGLNEDLSLEEVETIYLPLTRLLNLYIDSNLERQKVLNRFLGHPNGAKIP   80 (309)
T ss_pred             CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             97643333567776511442004566776504530000345677887689998887764455567788875387655553


Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             79995278666733799999999973389-86899950887588268876000201898133128999999997412664
Q gi|254780827|r   84 FVVGITGSVAVGKSTFARILCILLQQISN-FKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLLTFLSDVKSGKK  162 (311)
Q Consensus        84 fIIGIAG~~asGKST~Ar~L~~lL~~~~~-~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~~~L~~lK~G~~  162 (311)
T Consensus        81 ~~~~~~g~~~~g~~~~~~~l~~ll~~~p~~~~~~l~~~dgfl~p~~~l~~~~~~~~~gfp~~yd~~~l~~f~~d~~~g~~  160 (309)
T TIGR00554        81 YIIGIAGSVAVGKSTTARILQKLLSRWPDRRKVDLITTDGFLFPLAELKKKNLLSKKGFPESYDVPKLLEFLNDLKSGKP  160 (309)
T ss_pred             EEEEECCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             45540230001431268999999973676554034521430010356543000121478632335899999876422655


Q ss_pred             EEEEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCC-CCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf             05874044322565898369986896599706100357654575-77740100023115773088999887998878887
Q gi|254780827|r  163 KVAVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDN-QKATPMISDFLDFSIYIDADKRDIHRWYLNRFLKL  241 (311)
Q Consensus       163 ~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~-~~~~~~vsD~fD~sIyVDad~~~i~~wyi~Rf~~l  241 (311)
T Consensus       161 ~~~~p~y~hl~yd~~~~~~~~~~~~d~~~~~g~~~l~~~~~~~~~~~~~~f~~df~df~~y~d~~~~~~~~wy~~~f~~~  240 (309)
T TIGR00554       161 NVTAPVYSHLTYDVIPDGFEVVEQPDILILEGLNVLQSGTLEPDRDPPRVFVSDFVDFSIYVDAEEDLLFTWYLERFLKF  240 (309)
T ss_pred             CCCCCHHHHHHHHCCCCCCHHHCCCCEEEECCCHHHCCCCCCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf             22220122212100355200000343223304212217777766666523521000022452362567889999999876


Q ss_pred             HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEC
Q ss_conf             665201677799886059989999999999886316689995201313664999758998464899841
Q gi|254780827|r  242 RETAFLNPRSYFHHFTEISEEQSLKIAETAWNNINLPNLQHNILPTRKRADLILSKGEDHSVKTIKIKK  310 (311)
Q Consensus       242 r~~a~~~~~s~~~~y~~l~~~ea~~~a~~iW~~in~pnl~e~I~PTr~rADlIi~k~~~H~v~~i~lrk  310 (311)
T Consensus       241 ~~~~f~~p~~yf~~~~~l~~~~~~~~~~~~w~~~~~~~l~~~~lp~~~~~~l~l~~g~~h~~~~~~~~~  309 (309)
T TIGR00554       241 REGAFNDPDSYFHKYADLSKEEAIETAASLWEEINGLNLYENILPTRERADLILRKGDNHKVEEVLLRK  309 (309)
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHEECCCCCCHHHHCCCC
T ss_conf             531146704667665420045688889988875215431000133112100100137762002210059