HHsearch alignment for GI: 254780827 and conserved domain: TIGR02204

>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein; InterPro: IPR011918 This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins ..

Probab=96.65  E-value=0.0019  Score=43.12  Aligned_cols=68  Identities=32%  Similarity=0.466  Sum_probs=43.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC----------------------CCCHHHHHHHCHHHCCCCH
Q ss_conf             999527866673379999999997338986899950887----------------------5882688760002018981
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGF----------------------LFPNAVLTANNLMQRKGFP  142 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF----------------------~~~n~~l~~~~l~~rkGfP  142 (311)
T Consensus       368 tvAlVGPSGAGKSTlf----~LLLRFYDP~~G~ilLDGvd~r~~dP~~lR~~~ALVpQdp~lFa~Sv~eN----IRyGrp  439 (576)
T TIGR02204       368 TVALVGPSGAGKSTLF----QLLLRFYDPQSGRILLDGVDIRDLDPADLRARIALVPQDPALFAASVLEN----IRYGRP  439 (576)
T ss_pred             EEEEECCCCCHHHHHH----HHHHHCCCCCCCEEEECCCCHHHCCCHHHHHHCCCCCCCCCCCHHCCHHH----HCCCCC
T ss_conf             5887668876279999----99986048887657746641401680878834440258864102030442----135996


Q ss_pred             HHHHHHHHH--------HHHHHHHCC
Q ss_conf             331289999--------999974126
Q gi|254780827|r  143 ESYDSNKLL--------TFLSDVKSG  160 (311)
Q Consensus       143 eS~D~~~L~--------~~L~~lK~G  160 (311)
T Consensus       440 DAs~~~V~~AA~aA~A~EFI~~LP~G  465 (576)
T TIGR02204       440 DASDEEVEAAARAAHAHEFISALPEG  465 (576)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             66668999999875410156518875