HHsearch alignment for GI: 254780827 and conserved domain: TIGR03574

>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=97.62  E-value=0.00095  Score=45.18  Aligned_cols=115  Identities=20%  Similarity=0.258  Sum_probs=61.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             99952786667337999999999733898689995088758826887600020189813312899999999741266405
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLLTFLSDVKSGKKKV  164 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~~~L~~lK~G~~~V  164 (311)
T Consensus         1 Livl~GlP~SGKSt~a~~L~~~l~~~-~~~~i~~~~d~~~-~-----~~~~-----~~~~~-----Ek~~r~~~~--~~v   61 (249)
T TIGR03574         1 LIILTGLPGVGKSTFSKELSKKLSEK-NIDNIILGTDLIR-E-----SFPV-----WKEKY-----EEFIRDSTL--YLI   61 (249)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHH-CCCEEEECCCCCH-H-----HHHH-----CCHHH-----HHHHHHHHH--HHH
T ss_conf             97896789998999999999999982-9965996552002-1-----2000-----33677-----999899999--999


Q ss_pred             EEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEEC--CCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf             87404432256589836998689659970610035765457577740100--023115773088999887998878
Q gi|254780827|r  165 AVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMIS--DFLDFSIYIDADKRDIHRWYLNRF  238 (311)
Q Consensus       165 ~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vs--D~fD~sIyVDad~~~i~~wyi~Rf  238 (311)
T Consensus        62 ~----------------~~l~~~~~vI~D~~nYiKg~R--Y--EL~clAk~~~t~~c~I~~~~p~e~c~~~N~~R~  117 (249)
T TIGR03574        62 K----------------TALKNKYSVIVDDTNYYNSKR--R--DLINIAKEYNKNYIIIYLKAPLDTLLRRNIERG  117 (249)
T ss_pred             H----------------HHHCCCCEEEECCCCHHHHHH--H--HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCC
T ss_conf             9----------------984337669972732788999--9--999999984998699997399999999876068