HHsearch alignment for GI: 254780827 and conserved domain: cd02035
>cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.
Probab=95.75 E-value=0.016 Score=36.80 Aligned_cols=37 Identities=38% Similarity=0.421 Sum_probs=30.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 99952786667337999999999733898689995088
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDG 122 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~Dg 122 (311)
T Consensus 1 i~~~sGKGGVGKTTvAaalA~~lA~~-G~rvLlvs~DP 37 (217)
T cd02035 1 VIFFTGKGGVGKTTIAAATAVRLAEE-GKKVLLVSTDP 37 (217)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHC-CCEEEEEECCC
T ss_conf 98997899661999999999999968-99499995898