HHsearch alignment for GI: 254780827 and conserved domain: cd03114

>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=97.47  E-value=0.00016  Score=50.43  Aligned_cols=120  Identities=22%  Similarity=0.270  Sum_probs=65.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC--CCHHHHHHHCHHHCC-CCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9995278666733799999999973389868999508875--882688760002018-9813312899999999741266
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFL--FPNAVLTANNLMQRK-GFPESYDSNKLLTFLSDVKSGK  161 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~--~~n~~l~~~~l~~rk-GfPeS~D~~~L~~~L~~lK~G~  161 (311)
T Consensus         1 viGitG~pGaGKStLi~~l~~~~~~-~g~~VaVlavDPsS~~sgGalLGDRiRm~~~~~~~~vf--------iRs~atrg   71 (148)
T cd03114           1 VIGITGVPGAGKSTLIDALITALRA-RGKRVAVLAIDPSSPFSGGAILGDRIRMERHASDPGVF--------IRSLATRG   71 (148)
T ss_pred             CEEECCCCCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEE--------EEECCCCC
T ss_conf             9762589978789999999999997-89837999968887866862032354534415799836--------86346666


Q ss_pred             CEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCH
Q ss_conf             405874044322565898369986896599706100357654575777401000231157730889
Q gi|254780827|r  162 KKVAVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADK  227 (311)
Q Consensus       162 ~~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~  227 (311)
T Consensus        72 ~~---ggla~~~~~~i~--~l~~~g~D~IiIETvGvGQse---------~~i~~~aD~~i~v~~p~  123 (148)
T cd03114          72 FL---GGLSRATPEVIR--VLDAAGFDVIIVETVGVGQSE---------VDIASMADTTVVVMAPG  123 (148)
T ss_pred             CC---CCHHHHHHHHHH--HHHHCCCCEEEEECCCCCCCH---------HHHHHHCCEEEEEECCC
T ss_conf             54---204688999999--999759998999748777560---------26554356699996368