HHsearch alignment for GI: 254780827 and conserved domain: cd03224

>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=95.58  E-value=0.011  Score=37.86  Aligned_cols=24  Identities=29%  Similarity=0.490  Sum_probs=20.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             999527866673379999999997
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQ  108 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~  108 (311)
T Consensus        28 i~~liG~nGaGKSTLl~~i~Gl~~   51 (222)
T cd03224          28 IVALLGRNGAGKTTLLKTIMGLLP   51 (222)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCC
T ss_conf             999999999859999999977988