HHsearch alignment for GI: 254780827 and conserved domain: cd03269
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.72 E-value=0.03 Score=35.04 Aligned_cols=111 Identities=16% Similarity=0.270 Sum_probs=54.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCC-C-------------CCEEEEEECCCCCCHHH-HHHHCH-HHCCCCHHHHHH
Q ss_conf 7999527866673379999999997338-9-------------86899950887588268-876000-201898133128
Q gi|254780827|r 84 FVVGITGSVAVGKSTFARILCILLQQIS-N-------------FKVSLITTDGFLFPNAV-LTANNL-MQRKGFPESYDS 147 (311)
Q Consensus 84 fIIGIAG~~asGKST~Ar~L~~lL~~~~-~-------------~~V~lis~DgF~~~n~~-l~~~~l-~~rkGfPeS~D~ 147 (311)
T Consensus 27 ei~gllG~NGaGKTTll~~i~Gl~~p~~G~i~i~G~~~~~~~~~~ig~~pq~~~l~~~ltv~e~l~~~~~l~g~~~~~~~ 106 (210)
T cd03269 27 EIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR 106 (210)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf 59999989998499999999600266899899999868844360199964766679999999999999997499999999
Q ss_pred HHHHHHHHHHHCCC-CEEEEECCCCCCCCCCCCCEEEECCCCEEEEEC
Q ss_conf 99999999741266-405874044322565898369986896599706
Q gi|254780827|r 148 NKLLTFLSDVKSGK-KKVAVPRYSHSQYDILEGEYDTIIQPDILLIEG 194 (311)
Q Consensus 148 ~~L~~~L~~lK~G~-~~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEG 194 (311)
T Consensus 107 ~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrv~la~al~~~p~lllLDE 154 (210)
T cd03269 107 RRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILDE 154 (210)
T ss_pred HHHHHHHHHCCCCHHHCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 999999998699705488057789989999999999957998999928