HHsearch alignment for GI: 254780827 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=97.12 E-value=0.0014 Score=43.98 Aligned_cols=48 Identities=21% Similarity=0.313 Sum_probs=33.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCC----------------------CCEEEEEECCCCCCHHHHHH
Q ss_conf 9995278666733799999999973389----------------------86899950887588268876
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQISN----------------------FKVSLITTDGFLFPNAVLTA 132 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~~~~----------------------~~V~lis~DgF~~~n~~l~~ 132 (311)
T Consensus 29 ~~~IvG~sGsGKSTLl~~l~g~~~~~~G~I~~~~~~~~~~~~~~~~~~~r~~i~~v~Q~~~lf~~Tv~eN 98 (218)
T cd03290 29 LTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSVAYAAQKPWLLNATVEEN 98 (218)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHCCEEEEEECCCCCCCCCHHHH
T ss_conf 9999999998099999998555656776499898666864677788875653899815665678899998