HHsearch alignment for GI: 254780827 and conserved domain: cd03299

>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.53  E-value=0.005  Score=40.32  Aligned_cols=103  Identities=19%  Similarity=0.310  Sum_probs=58.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHH--------------CC--CCCEEEEEECCCCCCHH-HHH--HHCHHHCCCCHHHH
Q ss_conf             9995278666733799999999973--------------38--98689995088758826-887--60002018981331
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQ--------------IS--NFKVSLITTDGFLFPNA-VLT--ANNLMQRKGFPESY  145 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~--------------~~--~~~V~lis~DgF~~~n~-~l~--~~~l~~rkGfPeS~  145 (311)
T Consensus        27 ~~~iiGpSGsGKSTLlr~i~Gl~~p~~G~I~~~G~di~~~~~~~r~ig~vfQ~~~Lfp~~tV~eNi~~~l~-~~~~~~~e  105 (235)
T cd03299          27 YFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLK-KRKVDKKE  105 (235)
T ss_pred             EEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHCCEEEECCCCCCCCCCCHHHHHHHHHH-HCCCCHHH
T ss_conf             99999999635999999997499999659999999999999767897894579866899909999999998-76999999


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEE-------EECCCCEEEEEC
Q ss_conf             2899999999741266405874044322565898369-------986896599706
Q gi|254780827|r  146 DSNKLLTFLSDVKSGKKKVAVPRYSHSQYDILEGEYD-------TIIQPDILLIEG  194 (311)
Q Consensus       146 D~~~L~~~L~~lK~G~~~V~~PvYsh~~~D~vp~~~~-------vi~~pdIIIvEG  194 (311)
T Consensus       106 ~~~rv~e~l~~~gl~--~----~~~~~p~~LSGGq~QRVaiARAl~~~P~llllDE  155 (235)
T cd03299         106 IERKVLEIAEMLGID--H----LLNRKPETLSGGEQQRVAIARALVVNPKILLLDE  155 (235)
T ss_pred             HHHHHHHHHHHCCCH--H----HHHCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             999999999877997--7----8748944589999999999999973899899928