HHsearch alignment for GI: 254780827 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=96.00 E-value=0.0095 Score=38.42 Aligned_cols=46 Identities=22% Similarity=0.356 Sum_probs=27.6
Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC--CCEEEE
Q ss_conf 999987167766787679995278666733799999999973389--868999
Q gi|254780827|r 68 HQYNKFLNLKEESKIPFVVGITGSVAVGKSTFARILCILLQQISN--FKVSLI 118 (311)
Q Consensus 68 ~~~~~fl~~~~~~k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~~--~~V~li 118 (311)
T Consensus 126 ~~~~~~L~~~v~~~~--~ilIsG~TGSGKTT~l---~all~~i~~~~~riiti 173 (283)
T pfam00437 126 ADIAEFLRQAVQARG--NILVSGGTGSGKTTLL---YALLNEINTDDERIVTI 173 (283)
T ss_pred HHHHHHHHHHHHCCC--EEEEECCCCCCHHHHH---HHHHHHCCCCCCCEEEE
T ss_conf 999999999998197--5999889999889999---99998408777627873