HHsearch alignment for GI: 254780828 and conserved domain: PRK03996
>PRK03996 proteasome subunit alpha; Provisional.
Probab=99.96 E-value=4.1e-28 Score=195.59 Aligned_cols=173 Identities=22% Similarity=0.147 Sum_probs=145.8
Q ss_pred CCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC--CCCCCHH
Q ss_conf 37179999979979998136545053677445105798159759997313058899999999999998536--6563067
Q gi|254780828|r 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN--QLLRSSV 91 (190)
Q Consensus 14 ~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~--~~~~~~~ 91 (190)
T Consensus 34 ~GtT~Vgik~kdgVVla~~kr~~-s~li~~~~~~KI~~I~~~ig~~-~sG~~aD~~~lv~~~r~ea~~~~~~~g~~i~v~ 111 (245)
T PRK03996 34 RGTTAVGIKCKDGVVLAVDKRIT-SKLIEPSSIEKIFKIDDHIGAA-SAGLVADARVLIDRARVEAQINRLTYDEPIDVE 111 (245)
T ss_pred CCCCEEEEEECCEEEEEEEECCC-CCCCCCCCCCEEEEECCCEEEE-EECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 28978999969989999951478-7661677434089860746899-730554289999999999999999869973199
Q ss_pred HHHHHHHHHHH-------HHHCCC--EEEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHHH--
Q ss_conf 99999976112-------220131--0451378764699805863114132799606423457889852078999899--
Q gi|254780828|r 92 ELAKDWRMDKY-------LRNLEA--MILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-- 160 (190)
Q Consensus 92 ~~~~~~~~~~y-------~~~~~~--~~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~e-- 160 (190)
T Consensus 112 ~la~~ls~~~q~~tq~~g~RPfgv~lli~G~D~~gp~Ly~idpsG~~~~~~a~AiGsgs~~a~~~LEk~y~~~ms~eeai 191 (245)
T PRK03996 112 YLAKKICDLKQQYTQHGGVRPFGVALLIAGVDDGGPRLFETDPSGAYIEYKATAIGSGRDTVMEFLEKEYKEDLSLEEAI 191 (245)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 99999999999973313557730489999970898679998799887610379989883999999986555899999999
Q ss_pred -HHHHHHHHHHCCCEEECCCEEEEEEECCC
Q ss_conf -99999997540110225956999994178
Q gi|254780828|r 161 -IARKAMSIAADICVYTNHNIVLETLKVGD 189 (190)
Q Consensus 161 -la~~Al~~A~erDvyTgd~i~i~~i~~~~ 189 (190)
T Consensus 192 ~lal~aL~~~~~~~~-~~~~iEi~iv~~~~ 220 (245)
T PRK03996 192 ELALKALASATEGKL-DPENIEIAVIDVET 220 (245)
T ss_pred HHHHHHHHHHHCCCC-CCCCEEEEEEECCC
T ss_conf 999999999960679-98847999998589