HHsearch alignment for GI: 254780828 and conserved domain: PTZ00246

>PTZ00246 proteasome subunit alpha; Provisional.
Probab=99.96  E-value=9.7e-28  Score=193.27  Aligned_cols=175  Identities=18%  Similarity=0.087  Sum_probs=148.6

Q ss_pred             CCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC--CCCCCHH
Q ss_conf             37179999979979998136545053677445105798159759997313058899999999999998536--6563067
Q gi|254780828|r   14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN--QLLRSSV   91 (190)
Q Consensus        14 ~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~--~~~~~~~   91 (190)
T Consensus        30 ~g~ttVGIk~kdgVVlaaekr~~~~l~~~~~~~~KI~~I~~~ig~a-~aGl~aD~r~lv~~~R~ea~~~~~~~~~~i~v~  108 (253)
T PTZ00246         30 NASLTVGILCKEGVILGADKPISSKLLDPGKINEKIYKIDSHIFCA-VAGLTADANILINQCRLYAQRYRYNYGEPQPVE  108 (253)
T ss_pred             CCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE-EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             4697899997999999995367886755665545279966984799-973657589999999999999999859998799


Q ss_pred             HHHHHHHHHH-------HHHHCCCEEE--ECCC-CCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHHH-
Q ss_conf             9999997611-------2220131045--1378-764699805863114132799606423457889852078999899-
Q gi|254780828|r   92 ELAKDWRMDK-------YLRNLEAMIL--IADK-TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-  160 (190)
Q Consensus        92 ~~~~~~~~~~-------y~~~~~~~~~--~~~~-~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~e-  160 (190)
T Consensus       109 ~La~~la~~~q~yTq~~g~RPfgvslli~G~D~~~gp~Ly~~DPsG~~~~~ka~AiG~gs~~a~~~LEk~y~~~ms~eea  188 (253)
T PTZ00246        109 QLVVQICDLKQSYTQFGGLRPFGVSFLFAGYDENLGYQLYHTDPSGNYSGWKATAIGTNNQTAQSILKQEWKEDMTLEQG  188 (253)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHH
T ss_conf             99999999999873536756742799999872899967899879887854579998988089999998746699999999


Q ss_pred             --HHHHHHHHHHCCCEEECCCEEEEEEECCC
Q ss_conf             --99999997540110225956999994178
Q gi|254780828|r  161 --IARKAMSIAADICVYTNHNIVLETLKVGD  189 (190)
Q Consensus       161 --la~~Al~~A~erDvyTgd~i~i~~i~~~~  189 (190)
T Consensus       189 i~lAi~aL~~~~~~~~~~~~~iEvavvt~~~  219 (253)
T PTZ00246        189 LLLALKVLTKSMDSTTPKADKIEVGYLSKGN  219 (253)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
T ss_conf             9999999999985647988838999998268