HHsearch alignment for GI: 254780828 and conserved domain: PTZ00246
>PTZ00246 proteasome subunit alpha; Provisional.
Probab=99.96 E-value=9.7e-28 Score=193.27 Aligned_cols=175 Identities=18% Similarity=0.087 Sum_probs=148.6
Q ss_pred CCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC--CCCCCHH
Q ss_conf 37179999979979998136545053677445105798159759997313058899999999999998536--6563067
Q gi|254780828|r 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN--QLLRSSV 91 (190)
Q Consensus 14 ~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~--~~~~~~~ 91 (190)
T Consensus 30 ~g~ttVGIk~kdgVVlaaekr~~~~l~~~~~~~~KI~~I~~~ig~a-~aGl~aD~r~lv~~~R~ea~~~~~~~~~~i~v~ 108 (253)
T PTZ00246 30 NASLTVGILCKEGVILGADKPISSKLLDPGKINEKIYKIDSHIFCA-VAGLTADANILINQCRLYAQRYRYNYGEPQPVE 108 (253)
T ss_pred CCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE-EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 4697899997999999995367886755665545279966984799-973657589999999999999999859998799
Q ss_pred HHHHHHHHHH-------HHHHCCCEEE--ECCC-CCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHHH-
Q ss_conf 9999997611-------2220131045--1378-764699805863114132799606423457889852078999899-
Q gi|254780828|r 92 ELAKDWRMDK-------YLRNLEAMIL--IADK-TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE- 160 (190)
Q Consensus 92 ~~~~~~~~~~-------y~~~~~~~~~--~~~~-~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~e- 160 (190)
T Consensus 109 ~La~~la~~~q~yTq~~g~RPfgvslli~G~D~~~gp~Ly~~DPsG~~~~~ka~AiG~gs~~a~~~LEk~y~~~ms~eea 188 (253)
T PTZ00246 109 QLVVQICDLKQSYTQFGGLRPFGVSFLFAGYDENLGYQLYHTDPSGNYSGWKATAIGTNNQTAQSILKQEWKEDMTLEQG 188 (253)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHH
T ss_conf 99999999999873536756742799999872899967899879887854579998988089999998746699999999
Q ss_pred --HHHHHHHHHHCCCEEECCCEEEEEEECCC
Q ss_conf --99999997540110225956999994178
Q gi|254780828|r 161 --IARKAMSIAADICVYTNHNIVLETLKVGD 189 (190)
Q Consensus 161 --la~~Al~~A~erDvyTgd~i~i~~i~~~~ 189 (190)
T Consensus 189 i~lAi~aL~~~~~~~~~~~~~iEvavvt~~~ 219 (253)
T PTZ00246 189 LLLALKVLTKSMDSTTPKADKIEVGYLSKGN 219 (253)
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
T ss_conf 9999999999985647988838999998268