HHsearch results for GI: 254780828 and protein with PDBid: 1iru_I
>1iru_I 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4
Probab=100.00 E-value=5.9e-33 Score=224.52 Aligned_cols=172 Identities=17% Similarity=0.111 Sum_probs=147.6
Q ss_pred EEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC--CCCCHHHH
Q ss_conf 1799999799799981365450536774451057981597599973130588999999999999985366--56306799
Q gi|254780828|r 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQ--LLRSSVEL 93 (190)
Q Consensus 16 TTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~~--~~~~~~~~ 93 (190)
||+|||+++||||||||+|+|+|.++.+++++||++|+++++++ .+|..+|++.+.+.++.++++++.. ...++...
T Consensus 1 TTivGi~~~dgVvlaaD~r~t~g~~i~~~~~~KI~~I~~~i~~~-~aG~~aD~~~l~~~~~~~~~~~~~~~g~~~~v~~~ 79 (234)
T 1iru_I 1 TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC-GAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTA 79 (234)
T ss_dssp CCEEEEEETTEEEEEECCCEESSSBEEESSCCCEEEEETTEEEE-EEESHHHHHHHHHHHHHHHHHHHHHHCSCCCHHHH
T ss_pred CEEEEEEECCEEEEEECCCCCCCCEEECCCCCCEEEECCCEEEE-EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 92999998999999996886668786258745479967979999-95072899999999999999867860998989999
Q ss_pred HHHHHHHHHHHH--CCC--EEEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHH---HHHHHHH
Q ss_conf 999976112220--131--045137876469980586311413279960642345788985207899989---9999999
Q gi|254780828|r 94 AKDWRMDKYLRN--LEA--MILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166 (190)
Q Consensus 94 ~~~~~~~~y~~~--~~~--~~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~---ela~~Al 166 (190)
++.+....|.++ +.. .+.+.|..+|++|..|+.|+..+.+|.|+|||+.+|+++||+.|+++|+.+ +|+++||
T Consensus 80 ~~~l~~~l~~~~~~~~~~liiaG~D~~gp~Ly~idp~Gs~~~~~~~a~Gsgs~~a~~~Le~~~~~~ms~eeA~~l~~~al 159 (234)
T 1iru_I 80 NRMLKQMLFRYRGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAI 159 (234)
T ss_dssp HHHHHHHHHHTTTCSCEEEEEEEECSSCEEEEEECTTSCEEECSEEEESTTHHHHHHHHHHSCCTTCCHHHHHTHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 99999999736788736999999808998189990894289960785367538899999974358979999999999999
Q ss_pred HHHHCCCEEECCCEEEEEEECC
Q ss_conf 9754011022595699999417
Q gi|254780828|r 167 SIAADICVYTNHNIVLETLKVG 188 (190)
Q Consensus 167 ~~A~erDvyTgd~i~i~~i~~~ 188 (190)
..+.+||.++|+++++.+|+.+
T Consensus 160 ~~~~~~d~~sg~~v~i~vitkd 181 (234)
T 1iru_I 160 AAGIFNDLGSGSNIDLCVISKN 181 (234)
T ss_dssp HHHHHHCTTCCSCEEEEEEETT
T ss_pred HHHHHHCCCCCCCEEEEEEECC
T ss_conf 9999646888995899999689