HHsearch results for GI: 254780828 and protein with PDBid: 1j2p_A
>1j2p_A Alpha-ring, proteasome alpha subunit; hydrolase; 2.60A {Archaeoglobus fulgidus} SCOP: d.153.1.4 PDB: 1j2q_A*
Probab=99.95 E-value=5.9e-27 Score=187.03 Aligned_cols=173 Identities=18% Similarity=0.144 Sum_probs=139.8
Q ss_pred CCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHC--CCCCCCHH
Q ss_conf 3717999997997999813654505367744510579815975999731305889999999999999853--66563067
Q gi|254780828|r 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP--NQLLRSSV 91 (190)
Q Consensus 14 ~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~--~~~~~~~~ 91 (190)
||||+|||+++||||||||+|.+++.. .+++.+||++|+++++++ .+|.++|++.+.+.++.++.+++ .....++.
T Consensus 33 ~G~T~Igik~kdgVvlaad~~~~~~~~-~~~~~~KI~~I~~~i~~~-~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~ 110 (246)
T 1j2p_A 33 RGATAIGIKCKEGVILIADKRVGSKLL-EKDTIEKIYKIDEHICAA-TSGLVADARVLIDRARIEAQINRLTYDIPITVK 110 (246)
T ss_dssp TSCCEEEEEETTEEEEEEECCCSCTTB-CGGGCCSEEECSSSEEEE-EEECHHHHHHHHHHHHHHHHHHHHHSSSCCCHH
T ss_pred CCCCEEEEEECCEEEEEEECCCCCCCC-CCCCCCCEEECCCCEEEE-EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 598789999799999999667667672-556358789846979999-715678899999999999997189719988699
Q ss_pred HHHHHHHHHHH-------HHHCCCE-EEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHHH---
Q ss_conf 99999976112-------2201310-451378764699805863114132799606423457889852078999899---
Q gi|254780828|r 92 ELAKDWRMDKY-------LRNLEAM-ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE--- 160 (190)
Q Consensus 92 ~~~~~~~~~~y-------~~~~~~~-~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~e--- 160 (190)
.++..+....+ .+++... +++..+++|.+|..|+.|+..+.++.|+|+|+.+|+++||+.|+++|+.+|
T Consensus 111 ~la~~l~~~~~~~~~~~~~rP~~v~~li~G~D~~p~Ly~id~~Gs~~~~~~~a~G~gs~~~~~~Le~~~~~~mt~eeai~ 190 (246)
T 1j2p_A 111 ELAKKICDFKQQYTQYGGVRPFGVSLLIAGVNEVPKLYETDPSGALLEYKATAIGMGRMAVTEFFEKEYRDDLSFDDAMV 190 (246)
T ss_dssp HHHHHHHHHHHHTTSBTTBCCCCEEEEEEEESSSEEEEEECTTCCEEEBSEEEESTTHHHHHHHHHHHCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99999999999998742778617999999977997289986887667554899888669999999965447999999999
Q ss_pred HHHHHHHHHHCCCEEECCCEEEEEEECCC
Q ss_conf 99999997540110225956999994178
Q gi|254780828|r 161 IARKAMSIAADICVYTNHNIVLETLKVGD 189 (190)
Q Consensus 161 la~~Al~~A~erDvyTgd~i~i~~i~~~~ 189 (190)
++.+||..+.++|..+ ++++|.+++.++
T Consensus 191 la~~al~~~~~~d~~~-~~iei~vv~~~~ 218 (246)
T 1j2p_A 191 LGLVAMGLSIESELVP-ENIEVGYVKVDD 218 (246)
T ss_dssp HHHHHHHHHHTSCCCG-GGEEEEEEETTT
T ss_pred HHHHHHHHHHHCCCCC-CCEEEEEEEECC
T ss_conf 9999999997454777-966999999189