HHsearch results for GI: 254780828 and protein with PDBid: 1m4y_A

>1m4y_A ATP-dependent protease HSLV; N-terminal catalytic threonine residue, hydrolase; 2.10A {Thermotoga maritima} SCOP: d.153.1.4
Probab=100.00  E-value=9.2e-39  Score=260.84  Aligned_cols=170  Identities=57%  Similarity=0.960  Sum_probs=150.0

Q ss_pred             EEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf             17999997997999813654505367744510579815975999731305889999999999999853665630679999
Q gi|254780828|r   16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAK   95 (190)
Q Consensus        16 TTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (190)
                      ||||||+|+||||||||||+|+|++|.+|+++||+++++++++++.++.+++++.+......+.+++.......+...++
T Consensus         1 TTivai~~~dgVvlAaDtr~S~G~~i~~r~~~Ki~~i~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (171)
T 1m4y_A            1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRFEAKLREWGGNLTKAAVELAK   80 (171)
T ss_dssp             CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEETTTTEEEEEESCHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             CEEEEEEECCEEEEEECCCCCCCCEEEECCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             95999998999999988875148878917988888838994999974624458999999999887640455201599999


Q ss_pred             HHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCE
Q ss_conf             9976112220131045137876469980586311413279960642345788985207-899989999999997540110
Q gi|254780828|r   96 DWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICV  174 (190)
Q Consensus        96 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~-~~~sa~ela~~Al~~A~erDv  174 (190)
                      .+....+.+++...+...+..+++++..++.+..++++|+|+|||+.||+|+|+.+|+ ++++|+||+++||++|+||||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~a~GSG~~~a~g~l~~~~~~~~~~A~ela~~Ai~~Aae~dv  160 (171)
T 1m4y_A           81 DWRTDRVLRRLEALLLVADKENIFIISGNGEVIQPDDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIAGEICI  160 (171)
T ss_dssp             HHHHCTTGGGCCCEEEEECSSCEEEECTTSCEECCSSSEEEESTTHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCE
T ss_conf             99986666543223320146653388438965687378999964789999999960647899999999999999760154


Q ss_pred             EECCCEEEEEE
Q ss_conf             22595699999
Q gi|254780828|r  175 YTNHNIVLETL  185 (190)
Q Consensus       175 yTgd~i~i~~i  185 (190)
                      ||||+|+|+||
T Consensus       161 yTgd~v~i~~i  171 (171)
T 1m4y_A          161 YTNQNIVIEEV  171 (171)
T ss_dssp             TCCSCCEEEEC
T ss_pred             ECCCCEEEEEC
T ss_conf             62996899979