HHsearch results for GI: 254780828 and protein with PDBid: 1m4y_A
>1m4y_A ATP-dependent protease HSLV; N-terminal catalytic threonine residue, hydrolase; 2.10A {Thermotoga maritima} SCOP: d.153.1.4
Probab=100.00 E-value=9.2e-39 Score=260.84 Aligned_cols=170 Identities=57% Similarity=0.960 Sum_probs=150.0
Q ss_pred EEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 17999997997999813654505367744510579815975999731305889999999999999853665630679999
Q gi|254780828|r 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAK 95 (190)
Q Consensus 16 TTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (190)
||||||+|+||||||||||+|+|++|.+|+++||+++++++++++.++.+++++.+......+.+++.......+...++
T Consensus 1 TTivai~~~dgVvlAaDtr~S~G~~i~~r~~~Ki~~i~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (171)
T 1m4y_A 1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRFEAKLREWGGNLTKAAVELAK 80 (171)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEETTTTEEEEEESCHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CEEEEEEECCEEEEEECCCCCCCCEEEECCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 95999998999999988875148878917988888838994999974624458999999999887640455201599999
Q ss_pred HHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCE
Q ss_conf 9976112220131045137876469980586311413279960642345788985207-899989999999997540110
Q gi|254780828|r 96 DWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICV 174 (190)
Q Consensus 96 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~-~~~sa~ela~~Al~~A~erDv 174 (190)
.+....+.+++...+...+..+++++..++.+..++++|+|+|||+.||+|+|+.+|+ ++++|+||+++||++|+||||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~a~GSG~~~a~g~l~~~~~~~~~~A~ela~~Ai~~Aae~dv 160 (171)
T 1m4y_A 81 DWRTDRVLRRLEALLLVADKENIFIISGNGEVIQPDDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIAGEICI 160 (171)
T ss_dssp HHHHCTTGGGCCCEEEEECSSCEEEECTTSCEECCSSSEEEESTTHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCE
T ss_conf 99986666543223320146653388438965687378999964789999999960647899999999999999760154
Q ss_pred EECCCEEEEEE
Q ss_conf 22595699999
Q gi|254780828|r 175 YTNHNIVLETL 185 (190)
Q Consensus 175 yTgd~i~i~~i 185 (190)
||||+|+|+||
T Consensus 161 yTgd~v~i~~i 171 (171)
T 1m4y_A 161 YTNQNIVIEEV 171 (171)
T ss_dssp TCCSCCEEEEC
T ss_pred ECCCCEEEEEC
T ss_conf 62996899979