HHsearch results for GI: 254780828 and protein with PDBid: 1ryp_B
>1ryp_B 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1fnt_B 1g0u_A* 1jd2_A* 1g65_A 1z7q_B 2f16_A* 2fak_A* 2fny_A* 2gpl_A* 2zcy_A* 3bdm_A* 3d29_A* 3dy3_A* 3dy4_A* 3e47_A* 3gpj_A* 3gpt_A* 3gpw_A* 3hye_A* 1vsy_B ...
Probab=99.96 E-value=1.3e-27 Score=191.18 Aligned_cols=172 Identities=17% Similarity=0.078 Sum_probs=136.7
Q ss_pred CCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHH-H--CCCCCCCH
Q ss_conf 37179999979979998136545053677445105798159759997313058899999999999998-5--36656306
Q gi|254780828|r 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ-Y--PNQLLRSS 90 (190)
Q Consensus 14 ~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~-~--~~~~~~~~ 90 (190)
+|||+|||+++||||||+|+|++.+. +.+++.+||++|+++++++ .+|.++|.+.+.+.++..... + ......++
T Consensus 30 ~G~Tvvgik~~dgVvlaad~r~~~~~-~~~~~~~Ki~~i~~~i~~~-~sG~~~D~~~l~~~~r~~~~~~~~~~~~~~~~~ 107 (250)
T 1ryp_B 30 QGVTSLGIKATNGVVIATEKKSSSPL-AMSETLSKVSLLTPDIGAV-YSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPT 107 (250)
T ss_dssp TSCCEEEEEETTEEEEEEECCCSCSS-BCGGGCCSSEEEETTEEEE-EEECHHHHHHHHHHHHHHHHHTTHHHHSSCCCH
T ss_pred CCCCEEEEEECCEEEEEEECCCCCCC-CCCCCCCCEEEECCCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 49868999959999999936766655-1556556379971662379-997343189999999999999999985989999
Q ss_pred HHHHHHHH----HHHH---HHHCCC--EEEECCC-CCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHH-
Q ss_conf 79999997----6112---220131--0451378-76469980586311413279960642345788985207899989-
Q gi|254780828|r 91 VELAKDWR----MDKY---LRNLEA--MILIADK-TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE- 159 (190)
Q Consensus 91 ~~~~~~~~----~~~y---~~~~~~--~~~~~~~-~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~- 159 (190)
..+++... .+.+ .+++.. .+.+.|. .+|.+|..|+.|+..+.++.|+|||+.+|+++||+.|+++|+.+
T Consensus 108 ~~la~~~~~~~~~~~~~~~~rp~~v~~li~G~D~~~gp~Ly~id~~G~~~~~~~~a~G~gs~~~~~~Le~~y~~~ms~ee 187 (250)
T 1ryp_B 108 KLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELED 187 (250)
T ss_dssp HHHHHHHHHHHHHTTTSBTBCCCCEEEEEEEEETTTEEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEEEECCCEEEEECCEEEECCCHHHHHHHHHHHCCCCCCHHH
T ss_conf 99999999999997641466772689999987289996799985867999756899678509999999976458999899
Q ss_pred --HHHHHHHHHHHCCCEEECCCEEEEEEECC
Q ss_conf --99999999754011022595699999417
Q gi|254780828|r 160 --EIARKAMSIAADICVYTNHNIVLETLKVG 188 (190)
Q Consensus 160 --ela~~Al~~A~erDvyTgd~i~i~~i~~~ 188 (190)
+++.+||..+.++|. +++++++.+|+.+
T Consensus 188 a~~la~~al~~~~~~d~-~~~~iev~vi~~~ 217 (250)
T 1ryp_B 188 AIHIALLTLKESVEGEF-NGDTIELAIIGDE 217 (250)
T ss_dssp HHHHHHHHHHHHCCSCC-STTTEEEEEECSC
T ss_pred HHHHHHHHHHHHHHCCC-CCCCEEEEEEECC
T ss_conf 99999999999861668-8896899999679