HHsearch results for GI: 254780828 and protein with PDBid: 1yar_H

>1yar_H Proteasome beta subunit; proteasome 20S, PA26 proteasome activator 11S, hydrolase/hydrolase activator complex; 1.90A {Thermoplasma acidophilum} SCOP: d.153.1.4 PDB: 1ya7_H 1yau_H 3ipm_H 1pma_B 3jrm_H 3c92_H 3c91_H 3jse_H 3jtl_H
Probab=100.00  E-value=1.5e-31  Score=215.73  Aligned_cols=175  Identities=17%  Similarity=0.143  Sum_probs=149.1

Q ss_pred             CCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC--CCCCCHH
Q ss_conf             37179999979979998136545053677445105798159759997313058899999999999998536--6563067
Q gi|254780828|r   14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN--QLLRSSV   91 (190)
Q Consensus        14 ~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~--~~~~~~~   91 (190)
                      +|||+|||+++||||||+|+|+|.|+++.+++.+|||+|+++++++ ++|.++|++.+.+.++.+++.++.  ....++.
T Consensus         7 ~GtTivgi~~kdgVvlaaD~r~~~~~~~~~~~~~KI~~i~~~i~~~-~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~   85 (217)
T 1yar_H            7 TGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMT-IAGLVGDAQVLVRYMKAELELYRLQRRVNMPIE   85 (217)
T ss_dssp             --CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEEETTEEEE-EEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHH
T ss_pred             CCCCEEEEEECCEEEEEECCCCCCCCEECCCCCCEEEEECCCCEEE-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf             7463999998999999987876668763278755199977982267-555617899999999999777787428888999


Q ss_pred             HHHHHHHHHHHHHHCCCE----EEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCH---HHHHHH
Q ss_conf             999999761122201310----4513787646998058631141327996064234578898520789998---999999
Q gi|254780828|r   92 ELAKDWRMDKYLRNLEAM----ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARK  164 (190)
Q Consensus        92 ~~~~~~~~~~y~~~~~~~----~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa---~ela~~  164 (190)
                      ..+..++...+..++.|+    ++++.+.+|.++..|+.|+..+..++|+|+|+.+|+++||+.|+++|+.   .+++++
T Consensus        86 ~~~~~l~~~~~~~~~~p~~~~~liaG~d~~~~l~~iD~~G~~~~~~~~a~G~g~~~a~~~Le~~~~~~~s~~ea~~l~~~  165 (217)
T 1yar_H           86 AVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIR  165 (217)
T ss_dssp             HHHHHHHHHHHHTTTSCCCEEEEEEEESSSEEEEEECTTCCEEEESEEEESTTHHHHHHHHHHHCCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             99999999987226677427889974248875786179824887547853765599999999744379899999999999


Q ss_pred             HHHHHHCCCEEECCCEEEEEEECCC
Q ss_conf             9997540110225956999994178
Q gi|254780828|r  165 AMSIAADICVYTNHNIVLETLKVGD  189 (190)
Q Consensus       165 Al~~A~erDvyTgd~i~i~~i~~~~  189 (190)
                      ||..+.+||+.+|+++++.+|+.++
T Consensus       166 al~~~~~~d~~s~~~iev~~i~~~~  190 (217)
T 1yar_H          166 AISAAKQRDSASGGMIDVAVITRKD  190 (217)
T ss_dssp             HHHHHHHHCTTCCSCCEEEEEETTT
T ss_pred             HHHHHHHHCCCCCCEEEEEEEECCC
T ss_conf             9999997478889869999997899