HHsearch results for GI: 254780828 and protein with PDBid: 1yar_H
>1yar_H Proteasome beta subunit; proteasome 20S, PA26 proteasome activator 11S, hydrolase/hydrolase activator complex; 1.90A {Thermoplasma acidophilum} SCOP: d.153.1.4 PDB: 1ya7_H 1yau_H 3ipm_H 1pma_B 3jrm_H 3c92_H 3c91_H 3jse_H 3jtl_H
Probab=100.00 E-value=1.5e-31 Score=215.73 Aligned_cols=175 Identities=17% Similarity=0.143 Sum_probs=149.1
Q ss_pred CCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC--CCCCCHH
Q ss_conf 37179999979979998136545053677445105798159759997313058899999999999998536--6563067
Q gi|254780828|r 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN--QLLRSSV 91 (190)
Q Consensus 14 ~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~--~~~~~~~ 91 (190)
+|||+|||+++||||||+|+|+|.|+++.+++.+|||+|+++++++ ++|.++|++.+.+.++.+++.++. ....++.
T Consensus 7 ~GtTivgi~~kdgVvlaaD~r~~~~~~~~~~~~~KI~~i~~~i~~~-~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~ 85 (217)
T 1yar_H 7 TGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMT-IAGLVGDAQVLVRYMKAELELYRLQRRVNMPIE 85 (217)
T ss_dssp --CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEEETTEEEE-EEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHH
T ss_pred CCCCEEEEEECCEEEEEECCCCCCCCEECCCCCCEEEEECCCCEEE-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 7463999998999999987876668763278755199977982267-555617899999999999777787428888999
Q ss_pred HHHHHHHHHHHHHHCCCE----EEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCH---HHHHHH
Q ss_conf 999999761122201310----4513787646998058631141327996064234578898520789998---999999
Q gi|254780828|r 92 ELAKDWRMDKYLRNLEAM----ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARK 164 (190)
Q Consensus 92 ~~~~~~~~~~y~~~~~~~----~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa---~ela~~ 164 (190)
..+..++...+..++.|+ ++++.+.+|.++..|+.|+..+..++|+|+|+.+|+++||+.|+++|+. .+++++
T Consensus 86 ~~~~~l~~~~~~~~~~p~~~~~liaG~d~~~~l~~iD~~G~~~~~~~~a~G~g~~~a~~~Le~~~~~~~s~~ea~~l~~~ 165 (217)
T 1yar_H 86 AVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIR 165 (217)
T ss_dssp HHHHHHHHHHHHTTTSCCCEEEEEEEESSSEEEEEECTTCCEEEESEEEESTTHHHHHHHHHHHCCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 99999999987226677427889974248875786179824887547853765599999999744379899999999999
Q ss_pred HHHHHHCCCEEECCCEEEEEEECCC
Q ss_conf 9997540110225956999994178
Q gi|254780828|r 165 AMSIAADICVYTNHNIVLETLKVGD 189 (190)
Q Consensus 165 Al~~A~erDvyTgd~i~i~~i~~~~ 189 (190)
||..+.+||+.+|+++++.+|+.++
T Consensus 166 al~~~~~~d~~s~~~iev~~i~~~~ 190 (217)
T 1yar_H 166 AISAAKQRDSASGGMIDVAVITRKD 190 (217)
T ss_dssp HHHHHHHHCTTCCSCCEEEEEETTT
T ss_pred HHHHHHHHCCCCCCEEEEEEEECCC
T ss_conf 9999997478889869999997899