PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1fnt

gi|14488808|pdb|1FNT|D Chain D, Crystal Structure Of The 20s Proteasome From Yeast In Complex With The Proteasome Activator Pa26 From Trypanosome Brucei At 3.2 Angstroms Resolution Length = 254
>gi|14488822|pdb|1FNT|R Chain R, Crystal Structure Of The 20s Proteasome From Yeast In Complex With The Proteasome Activator Pa26 From Trypanosome Brucei At 3.2 Angstroms Resolution Length = 254

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 19/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    KV ++    +++ F+G +AD+  L+E
Sbjct: 29  RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
           +   + + +   L               + + +     +R      LIA          +
Sbjct: 88  KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTN 177
                  +        IG                     + EE  +  +    ++ V T 
Sbjct: 148 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEV-VQTG 206

Query: 178 H-NIVLETLKVGDE 190
             NI +  +K   +
Sbjct: 207 AKNIEITVVKPDSD 220