PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1iru

gi|21465645|pdb|1IRU|D Chain D, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 248
>gi|21465659|pdb|1IRU|R Chain R, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 248
 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195