PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1iru
gi|21465645|pdb|1IRU|D Chain D, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 248
>gi|21465659|pdb|1IRU|R Chain R, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 248
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+T + VR +VV+ + + S+ + + RK+ L + FAG +ADA ++
Sbjct: 28 KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85
Query: 74 RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
R + + + + +A + + A +
Sbjct: 86 RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
AIG G T + ++ KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195