PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1iru

gi|21465652|pdb|1IRU|K Chain K, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 201
>gi|21465666|pdb|1IRU|Y Chain Y, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 201
 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165